Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS16610

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
3,802,009	+				+2.0
3,802,030	+				+0.2
3,802,150	+				+1.2
3,802,199	+		HSERO_RS16605	0.19	-0.9
3,802,207	-		HSERO_RS16605	0.20	-1.9
3,802,356	-		HSERO_RS16605	0.39	-1.3
3,802,419	+		HSERO_RS16605	0.48	-0.1
3,802,440	+		HSERO_RS16605	0.50	-3.5
3,802,455	-		HSERO_RS16605	0.52	+0.3
3,802,534	-		HSERO_RS16605	0.63	-1.2
3,802,557	-		HSERO_RS16605	0.66	-2.4
3,802,666	+		HSERO_RS16605	0.80	-0.2
3,802,830	-				-2.1
3,802,850	+				-0.7
3,802,873	-				-0.5
3,803,010	+				+0.4
3,803,010	+				-0.7
3,803,013	-				-2.2
3,803,049	-				+1.0
3,803,067	+				-0.1
3,803,075	-				-0.6
3,803,114	+		HSERO_RS16610	0.15	+0.6
3,803,122	-		HSERO_RS16610	0.16	-0.0
3,803,445	-		HSERO_RS16610	0.61	+1.6
3,803,455	-		HSERO_RS16610	0.62	+0.6
3,803,638	+		HSERO_RS16610	0.88	+0.5
3,803,638	+		HSERO_RS16610	0.88	-0.1
3,803,638	+		HSERO_RS16610	0.88	+0.8
3,803,835	-				-1.2
3,803,845	+				-2.0
3,803,902	-				-0.5
3,803,915	+				+1.0
3,803,923	-				-0.2
3,803,923	-				+1.1
3,804,049	-				+0.1
3,804,142	+				-0.5
3,804,157	-				+0.6
3,804,276	+				-2.1
3,804,353	-		HSERO_RS16615	0.11	-2.1
3,804,601	+		HSERO_RS16615	0.38	+0.3
3,804,677	-		HSERO_RS16615	0.47	+0.3