Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS16590

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
3,797,899	-		HSERO_RS16585	0.47	+0.7
3,797,926	+		HSERO_RS16585	0.48	-0.9
3,798,163	-		HSERO_RS16585	0.63	-2.1
3,798,272	+		HSERO_RS16585	0.69	-2.7
3,798,341	+		HSERO_RS16585	0.73	+0.4
3,798,363	+		HSERO_RS16585	0.75	-0.6
3,798,449	-		HSERO_RS16585	0.80	-0.7
3,798,480	+		HSERO_RS16585	0.82	-3.7
3,798,483	-		HSERO_RS16585	0.82	-0.6
3,798,488	-		HSERO_RS16585	0.82	-0.3
3,798,586	-		HSERO_RS16585	0.88	-1.0
3,798,641	+				-0.3
3,798,684	+				-0.8
3,798,824	+				-0.5
3,798,824	+				-0.0
3,798,832	-				+0.4
3,798,832	-				+3.2
3,798,834	+				+0.0
3,798,928	+				-0.9
3,798,936	-				+0.8
3,799,164	+		HSERO_RS16590	0.22	-1.9
3,799,320	+		HSERO_RS16590	0.35	+0.3
3,799,371	+		HSERO_RS16590	0.39	+1.4
3,799,379	-		HSERO_RS16590	0.40	+0.5
3,799,687	+		HSERO_RS16590	0.65	-1.5
3,799,892	-		HSERO_RS16590	0.81	+0.0
3,799,915	-		HSERO_RS16590	0.83	-1.0
3,799,943	+		HSERO_RS16590	0.85	+2.8
3,800,008	+				+0.6
3,800,388	+		HSERO_RS16595	0.88	-1.3
3,800,418	-				-0.7
3,800,424	+				+1.6
3,800,595	-				-1.9
3,800,628	+				-0.3
3,800,628	+				+2.7
3,800,917	+		HSERO_RS16600	0.26	+1.0
3,800,997	+		HSERO_RS16600	0.32	-1.2
3,801,016	-		HSERO_RS16600	0.33	+1.7