Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS15395

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
3,522,279	+				+0.6
3,522,505	+		HSERO_RS15390	0.25	-1.3
3,522,619	+		HSERO_RS15390	0.38	+0.6
3,522,642	-		HSERO_RS15390	0.40	+0.9
3,523,069	+				-0.4
3,523,123	-				+0.2
3,523,192	-				-0.6
3,523,493	-		HSERO_RS15395	0.21	+0.8
3,523,709	-		HSERO_RS15395	0.35	-0.7
3,523,769	-		HSERO_RS15395	0.39	+0.9
3,523,798	-		HSERO_RS15395	0.41	-0.0
3,524,064	-		HSERO_RS15395	0.59	+2.7
3,524,183	+		HSERO_RS15395	0.66	-1.1
3,524,258	-		HSERO_RS15395	0.71	+3.0
3,524,356	+		HSERO_RS15395	0.78	-0.7
3,524,499	+		HSERO_RS15395	0.87	+0.1
3,524,511	+		HSERO_RS15395	0.88	-0.6
3,524,587	+				-0.7
3,524,603	+				-1.9
3,524,706	+				-1.3
3,524,713	+				-1.9
3,524,721	-				+0.0
3,524,859	+				-0.0
3,524,877	+				+1.5
3,524,972	+		HSERO_RS15400	0.17	-1.0
3,524,978	-		HSERO_RS15400	0.17	+0.3
3,525,089	-		HSERO_RS15400	0.26	+1.8
3,525,089	-		HSERO_RS15400	0.26	+0.1
3,525,161	-		HSERO_RS15400	0.32	-1.1
3,525,429	+		HSERO_RS15400	0.54	+1.1