Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS14465

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
3,279,031	-				+0.2
3,279,071	-				-0.3
3,279,086	+				+1.0
3,279,089	-				-0.4
3,279,144	+				-1.4
3,279,304	+				-0.1
3,279,444	-				-0.2
3,279,473	+				+0.9
3,279,508	-				-2.0
3,279,620	+				-0.1
3,279,627	+				-1.4
3,279,628	-				-0.1
3,279,648	-				-0.1
3,279,870	-				+0.8
3,279,969	-				+0.7
3,280,002	+				+0.2
3,280,123	-		HSERO_RS14465	0.10	-2.1
3,280,187	-		HSERO_RS14465	0.16	+1.4
3,280,446	-		HSERO_RS14465	0.39	-0.5
3,280,554	-		HSERO_RS14465	0.48	-0.2
3,280,567	-		HSERO_RS14465	0.49	+0.6
3,280,972	-		HSERO_RS14465	0.85	-1.0
3,281,008	+		HSERO_RS14465	0.88	+1.5
3,281,012	+		HSERO_RS14465	0.88	+0.6
3,281,013	+		HSERO_RS14465	0.88	+0.2
3,281,015	-		HSERO_RS14465	0.89	-0.2
3,281,015	-		HSERO_RS14465	0.89	-0.0
3,281,111	-				+0.5
3,281,343	+				+0.0
3,281,349	+				-0.1
3,281,351	-				+0.8
3,281,351	-				-0.2
3,281,351	-				+1.2
3,281,351	-				+0.1
3,281,698	+		HSERO_RS14470	0.27	-2.1
3,281,748	+		HSERO_RS14470	0.31	+0.7
3,281,771	-		HSERO_RS14470	0.33	-2.0