Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS14460

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
3,275,310	-		HSERO_RS14455	0.66	+0.5
3,275,407	+		HSERO_RS14455	0.70	-0.4
3,275,677	+		HSERO_RS14455	0.83	+1.1
3,275,758	+		HSERO_RS14455	0.87	+0.8
3,275,762	+		HSERO_RS14455	0.87	-0.9
3,275,766	-		HSERO_RS14455	0.87	+2.0
3,275,773	+		HSERO_RS14455	0.87	+0.2
3,275,997	+				+0.1
3,276,076	+				+0.1
3,276,180	+				-0.8
3,276,263	+				+0.9
3,276,293	+				-1.2
3,276,371	-				+0.9
3,276,523	-		HSERO_RS14460	0.13	-0.3
3,276,736	-		HSERO_RS14460	0.20	-4.4
3,276,931	+		HSERO_RS14460	0.27	+0.2
3,276,948	-		HSERO_RS14460	0.28	+0.4
3,277,146	+		HSERO_RS14460	0.35	+3.0
3,277,230	-		HSERO_RS14460	0.38	-1.4
3,277,236	+		HSERO_RS14460	0.38	+0.1
3,277,278	-		HSERO_RS14460	0.40	-3.6
3,277,359	+		HSERO_RS14460	0.43	-0.1
3,277,366	+		HSERO_RS14460	0.43	-0.6
3,277,477	+		HSERO_RS14460	0.47	-1.4
3,277,482	+		HSERO_RS14460	0.47	+0.8
3,277,501	+		HSERO_RS14460	0.48	-0.2
3,277,577	-		HSERO_RS14460	0.50	-1.1
3,277,581	+		HSERO_RS14460	0.50	-0.3
3,277,664	+		HSERO_RS14460	0.53	-1.8
3,277,738	+		HSERO_RS14460	0.56	+0.7
3,277,835	-		HSERO_RS14460	0.59	-1.8
3,277,890	-		HSERO_RS14460	0.61	-1.9
3,278,100	+		HSERO_RS14460	0.69	-0.3
3,278,147	+		HSERO_RS14460	0.71	-1.5
3,278,424	-		HSERO_RS14460	0.80	+0.8
3,278,531	+		HSERO_RS14460	0.84	+0.8
3,278,686	+		HSERO_RS14460	0.90	+1.0
3,278,803	-				+0.1
3,278,836	-				+0.3
3,278,921	-				+0.9
3,278,965	+				-0.8
3,279,031	-				+0.2
3,279,071	-				-0.3
3,279,086	+				+1.0
3,279,089	-				-0.4
3,279,144	+				-1.4
3,279,304	+				-0.1
3,279,444	-				-0.2
3,279,473	+				+0.9
3,279,508	-				-2.0
3,279,620	+				-0.1
3,279,627	+				-1.4
3,279,628	-				-0.1
3,279,648	-				-0.1
3,279,870	-				+0.8
3,279,969	-				+0.7