Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS13620

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
3,089,934	+		HSERO_RS13615	0.69	-0.2
3,089,934	+		HSERO_RS13615	0.69	-1.9
3,089,942	-		HSERO_RS13615	0.70	-1.9
3,090,177	-				-1.5
3,090,237	-				-1.2
3,090,242	-				+0.0
3,090,295	+				+0.0
3,090,307	+				-1.3
3,090,535	-				+0.4
3,090,576	-				-0.9
3,090,752	+				+0.2
3,090,926	+				-0.0
3,090,932	+				-0.3
3,090,978	+				+1.6
3,091,184	+				+0.4
3,091,223	+		HSERO_RS13620	0.10	+0.7
3,091,774	-		HSERO_RS13620	0.28	+1.7
3,091,914	+		HSERO_RS13620	0.32	-3.5
3,092,063	-		HSERO_RS13620	0.37	-1.2
3,092,405	+		HSERO_RS13620	0.48	-1.7
3,092,489	-		HSERO_RS13620	0.50	+0.1
3,092,585	-		HSERO_RS13620	0.53	-0.8
3,092,655	-		HSERO_RS13620	0.55	-1.4
3,092,739	-		HSERO_RS13620	0.58	+2.2
3,093,144	+		HSERO_RS13620	0.71	+1.1
3,093,343	+		HSERO_RS13620	0.77	-0.8
3,093,425	-		HSERO_RS13620	0.80	+0.3
3,093,480	+		HSERO_RS13620	0.81	+0.6
3,093,501	-		HSERO_RS13620	0.82	+0.8
3,093,736	-		HSERO_RS13620	0.89	-0.0
3,094,013	-				+0.0
3,094,086	-				+0.5
3,094,096	-				+0.3
3,094,368	-		HSERO_RS13625	0.20	+0.9
3,094,796	-		HSERO_RS13625	0.53	-1.1
3,094,825	-		HSERO_RS13625	0.56	-0.0
3,094,977	-		HSERO_RS13625	0.68	-0.3
3,095,055	+		HSERO_RS13625	0.74	-1.7