Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12575

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
2,867,956	-				-0.6
2,867,957	-				-0.6
2,868,127	-				-0.9
2,868,203	+				-1.4
2,868,203	+				-2.6
2,868,229	-				+0.6
2,868,430	+		HSERO_RS12575	0.21	+2.0
2,868,492	-		HSERO_RS12575	0.29	+0.2
2,868,640	+		HSERO_RS12575	0.46	+1.2
2,868,843	+				+2.0
2,868,874	-		HSERO_RS12575	0.73	-0.3
2,869,002	+		HSERO_RS12575	0.87	-0.8
2,869,259	+		HSERO_RS12580	0.11	+0.1
2,869,267	-		HSERO_RS12580	0.11	+1.3
2,869,326	+		HSERO_RS12580	0.15	-0.5
2,869,330	+		HSERO_RS12580	0.16	+0.0