Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12570

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
2,864,727	-		HSERO_RS12560	0.13	-1.3
2,864,822	+		HSERO_RS12560	0.37	-1.2
2,864,844	+				+3.2
2,864,859	+		HSERO_RS12560	0.46	+3.0
2,864,962	+		HSERO_RS12560	0.72	+0.6
2,864,962	+		HSERO_RS12560	0.72	-1.8
2,864,970	-		HSERO_RS12560	0.74	-1.6
2,865,021	-		HSERO_RS12560	0.87	-0.9
2,865,086	+				-1.4
2,865,119	+		HSERO_RS12565	0.14	+0.7
2,865,133	-		HSERO_RS12565	0.18	-1.7
2,865,138	-		HSERO_RS12565	0.20	+0.6
2,865,393	-				+0.1
2,865,424	-				-1.0
2,865,507	-				+1.0
2,865,650	+				-1.3
2,867,956	-				-0.6
2,867,957	-				-0.6
2,868,127	-				-0.9
2,868,203	+				-1.4
2,868,203	+				-2.6
2,868,229	-				+0.6
2,868,430	+		HSERO_RS12575	0.21	+2.0
2,868,492	-		HSERO_RS12575	0.29	+0.2
2,868,640	+		HSERO_RS12575	0.46	+1.2
2,868,843	+				+2.0
2,868,874	-		HSERO_RS12575	0.73	-0.3