Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12020

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
2,731,627	+		HSERO_RS12010	0.57	-0.8
2,731,676	-		HSERO_RS12010	0.69	-0.6
2,731,818	+				-0.0
2,731,841	-				+0.8
2,731,841	-				+1.3
2,731,841	-				+0.1
2,731,925	-				+0.0
2,732,044	-				+1.9
2,732,068	-		HSERO_RS12015	0.12	-0.3
2,732,457	-				-0.5
2,732,480	-				+0.8
2,732,501	-				-0.3
2,732,537	-				+0.4
2,732,563	+				-0.3
2,732,630	-		HSERO_RS12020	0.13	-0.7
2,732,711	+		HSERO_RS12020	0.18	-0.4
2,732,856	+				+1.6
2,732,856	+		HSERO_RS12020	0.26	-0.6
2,732,977	+		HSERO_RS12020	0.33	+0.6
2,733,063	+		HSERO_RS12020	0.38	+0.5
2,733,118	+		HSERO_RS12020	0.42	+0.0
2,733,177	+		HSERO_RS12020	0.45	+1.2
2,733,325	-		HSERO_RS12020	0.53	+0.8
2,733,560	-		HSERO_RS12020	0.67	+1.8
2,733,677	-		HSERO_RS12020	0.74	+1.9
2,734,036	+				+0.6
2,734,090	-				+0.6
2,734,097	-				-1.0
2,734,184	+				+1.9
2,734,194	+				-2.3
2,734,202	-				+0.4
2,734,271	-		HSERO_RS12025	0.18	+0.6
2,734,411	+		HSERO_RS12025	0.36	+0.6
2,734,423	+		HSERO_RS12025	0.38	+0.9
2,734,613	+		HSERO_RS12025	0.63	-0.5
2,734,952	-				-0.7
2,735,083	+				-0.6