Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS11545

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
2,607,893	+				-0.2
2,608,193	-		HSERO_RS11540	0.32	-0.8
2,608,342	+		HSERO_RS11540	0.47	-0.1
2,608,408	+		HSERO_RS11540	0.53	-0.1
2,608,680	+		HSERO_RS11540	0.80	+0.6
2,608,759	+		HSERO_RS11540	0.88	-0.5
2,608,764	+		HSERO_RS11540	0.88	+1.9
2,608,789	-				-0.2
2,608,789	-				-0.1
2,608,855	+				+1.3
2,608,926	+				-0.3
2,608,965	+		HSERO_RS11545	0.15	+1.0
2,608,965	+		HSERO_RS11545	0.15	+1.1
2,609,007	+		HSERO_RS11545	0.23	-0.7
2,609,007	+		HSERO_RS11545	0.23	+1.7
2,609,015	-		HSERO_RS11545	0.25	+0.4
2,609,015	-		HSERO_RS11545	0.25	-0.5
2,609,176	+		HSERO_RS11545	0.57	+0.4
2,609,220	+				+3.0
2,609,281	-		HSERO_RS11545	0.78	-1.8
2,609,344	+				-0.7
2,609,376	-				+0.1
2,609,413	+				-1.6
2,609,424	-				-0.1
2,609,614	+				+0.2
2,609,673	-				+1.7
2,609,679	-				-2.4
2,609,768	-		HSERO_RS11550	0.21	-0.3
2,609,793	+		HSERO_RS11550	0.24	+0.2
2,609,823	-		HSERO_RS11550	0.27	+0.8
2,610,059	-		HSERO_RS11550	0.56	-0.6
2,610,164	+		HSERO_RS11550	0.69	+0.8
2,610,182	+		HSERO_RS11550	0.71	+1.1
2,610,190	-		HSERO_RS11550	0.72	-4.0
2,610,302	-		HSERO_RS11550	0.86	-0.6
2,610,316	+		HSERO_RS11550	0.87	+0.7