Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10600

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
2,385,657	+		HSERO_RS10595	0.36	+0.2
2,385,872	-		HSERO_RS10595	0.60	+0.7
2,385,926	-		HSERO_RS10595	0.66	+0.1
2,385,964	+		HSERO_RS10595	0.70	-0.6
2,386,090	-		HSERO_RS10595	0.84	+0.2
2,386,311	+				+1.4
2,386,436	-				+1.7
2,386,579	-		HSERO_RS10600	0.15	-0.2
2,386,589	-		HSERO_RS10600	0.16	-0.9
2,386,746	-		HSERO_RS10600	0.27	-0.6
2,386,746	-		HSERO_RS10600	0.27	+0.3
2,386,773	-		HSERO_RS10600	0.29	+1.1
2,386,923	-		HSERO_RS10600	0.40	+0.9
2,387,111	+		HSERO_RS10600	0.54	-0.5
2,387,196	-				+0.6
2,387,380	-		HSERO_RS10600	0.74	-1.1
2,387,523	+		HSERO_RS10600	0.85	-0.7
2,388,037	-		HSERO_RS10605	0.37	-1.4
2,388,256	+		HSERO_RS10605	0.73	-2.0
2,388,570	+		HSERO_RS10610	0.16	-0.4
2,388,649	+		HSERO_RS10610	0.25	-0.1