Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10590

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
2,382,388	+		HSERO_RS10580	0.41	-0.1
2,382,448	-		HSERO_RS10580	0.49	-0.3
2,382,730	-		HSERO_RS10580	0.85	+1.8
2,382,849	-				-0.6
2,382,869	+				-0.7
2,383,341	-				+0.2
2,383,444	-				+0.4
2,383,519	-				-0.8
2,383,565	-		HSERO_RS10590	0.12	-0.3
2,383,622	+		HSERO_RS10590	0.15	+1.2
2,383,721	-		HSERO_RS10590	0.21	+1.4
2,383,744	-		HSERO_RS10590	0.22	+0.1
2,383,781	-		HSERO_RS10590	0.24	+0.2
2,384,031	+		HSERO_RS10590	0.39	-0.7
2,384,031	+				-0.7
2,384,039	-		HSERO_RS10590	0.39	-0.7
2,384,039	-		HSERO_RS10590	0.39	+1.1
2,384,039	-		HSERO_RS10590	0.39	-0.0
2,384,134	+		HSERO_RS10590	0.44	-0.8
2,384,272	-		HSERO_RS10590	0.52	+0.5
2,384,345	-		HSERO_RS10590	0.57	+0.5
2,384,463	+		HSERO_RS10590	0.63	-1.7
2,384,520	-		HSERO_RS10590	0.67	-1.7
2,384,553	+		HSERO_RS10590	0.69	-0.4
2,384,576	+		HSERO_RS10590	0.70	-2.5
2,384,586	-		HSERO_RS10590	0.70	+0.3
2,384,620	+		HSERO_RS10590	0.72	-0.5
2,384,658	-		HSERO_RS10590	0.75	+0.4
2,384,760	-		HSERO_RS10590	0.80	+0.9
2,384,760	-		HSERO_RS10590	0.80	+0.2
2,384,774	+		HSERO_RS10590	0.81	-0.3
2,385,074	-				-1.6
2,385,249	-				-0.0
2,385,273	+				+0.3
2,385,657	+		HSERO_RS10595	0.36	+0.2
2,385,872	-		HSERO_RS10595	0.60	+0.7
2,385,926	-		HSERO_RS10595	0.66	+0.1
2,385,964	+		HSERO_RS10595	0.70	-0.6
2,386,090	-		HSERO_RS10595	0.84	+0.2