Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09380

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
2,128,233	+		HSERO_RS09370	0.11	+0.9
2,128,241	-		HSERO_RS09370	0.13	-2.1
2,128,359	-		HSERO_RS09370	0.42	-0.4
2,128,453	+				+2.6
2,128,543	-		HSERO_RS09370	0.88	-1.0
2,128,546	+		HSERO_RS09370	0.89	-4.1
2,128,618	-				-0.7
2,128,689	+				-1.2
2,128,696	-				-1.6
2,128,808	-		HSERO_RS09375	0.15	+0.5
2,128,812	-		HSERO_RS09375	0.17	-0.9
2,128,950	-		HSERO_RS09375	0.56	-1.9
2,129,100	-				-2.8
2,129,207	+				-1.7
2,129,215	-				+0.2
2,129,641	+		HSERO_RS09380	0.18	+1.2
2,129,800	+		HSERO_RS09380	0.24	-0.2
2,130,087	-		HSERO_RS09380	0.36	-0.5
2,130,252	+		HSERO_RS09380	0.42	+0.1
2,130,752	+		HSERO_RS09380	0.63	+1.1
2,130,843	-		HSERO_RS09380	0.66	-0.1
2,130,878	-		HSERO_RS09380	0.68	+0.7
2,131,097	+		HSERO_RS09380	0.76	+0.9
2,131,366	-		HSERO_RS09380	0.87	-1.2
2,131,591	+				-1.2
2,131,599	-				+0.1
2,131,662	+				+0.6
2,131,809	-				-1.5
2,131,966	+		HSERO_RS09385	0.49	+0.5
2,132,357	-		HSERO_RS09390	0.11	-0.2