Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS08730

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
1,979,514	-				-2.1
1,979,561	+				+1.9
1,979,607	-				+0.4
1,979,607	-				+0.7
1,979,699	+		HSERO_RS08725	0.20	+0.6
1,979,837	+		HSERO_RS08725	0.36	+0.0
1,979,911	-		HSERO_RS08725	0.44	+1.9
1,979,932	+		HSERO_RS08725	0.47	+2.2
1,980,454	-				+0.4
1,980,461	+				+0.8
1,980,474	-				-0.3
1,980,630	+		HSERO_RS08730	0.15	+1.4
1,980,636	+		HSERO_RS08730	0.15	-0.8
1,980,644	-		HSERO_RS08730	0.16	-0.3
1,980,784	+		HSERO_RS08730	0.25	+0.4
1,981,065	-		HSERO_RS08730	0.44	+2.2
1,981,182	-		HSERO_RS08730	0.52	-1.7
1,981,290	+		HSERO_RS08730	0.59	-3.0
1,981,520	+		HSERO_RS08730	0.75	+2.6
1,981,528	-		HSERO_RS08730	0.75	-0.5
1,981,560	+				-0.7
1,981,584	+		HSERO_RS08730	0.79	+0.7
1,981,606	+		HSERO_RS08730	0.80	-0.9
1,981,620	+		HSERO_RS08730	0.81	-3.2
1,981,675	-		HSERO_RS08730	0.85	+0.5
1,981,717	-		HSERO_RS08730	0.88	-0.3
1,981,977	-				-1.3
1,982,105	+		HSERO_RS08735	0.32	-1.5
1,982,147	+		HSERO_RS08735	0.42	-2.3
1,982,169	-		HSERO_RS08735	0.48	-0.8
1,982,175	+		HSERO_RS08735	0.50	+1.4
1,982,178	-		HSERO_RS08735	0.51	-0.9
1,982,308	+		HSERO_RS08735	0.84	+1.2
1,982,328	-		HSERO_RS08735	0.90	+3.5
1,982,542	+				-0.5
1,982,545	-				+1.6
1,982,550	-				+0.3
1,982,557	+				-0.1
1,982,570	-				+0.1
1,982,742	+		HSERO_RS08740	0.15	-0.0
1,982,756	+		HSERO_RS08740	0.16	-0.2
1,982,813	-		HSERO_RS08740	0.21	+1.0