Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS07820

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
1,787,149	+		HSERO_RS07810	0.70	+0.1
1,787,157	-		HSERO_RS07810	0.71	-2.5
1,787,157	-		HSERO_RS07810	0.71	-0.0
1,787,157	-		HSERO_RS07810	0.71	-0.2
1,787,198	-		HSERO_RS07810	0.73	+1.4
1,787,216	-		HSERO_RS07810	0.75	+0.9
1,787,608	+				-0.5
1,787,669	+				+2.9
1,787,669	+				-2.3
1,788,095	-		HSERO_RS07820	0.28	-0.6
1,788,148	+		HSERO_RS07820	0.41	-1.6
1,788,178	+		HSERO_RS07820	0.48	-0.2
1,788,186	-		HSERO_RS07820	0.50	+0.5
1,788,203	+		HSERO_RS07820	0.54	-1.5
1,788,254	+		HSERO_RS07820	0.67	+0.1
1,788,373	-				-1.0
1,788,553	-				-0.5
1,788,560	-				-0.2
1,788,560	-				-1.6
1,788,565	-				-1.0
1,788,954	-				-1.5
1,789,051	+				-1.3
1,789,059	-				-0.2
1,789,110	-				-0.6
1,789,164	+				-1.0
1,789,195	+				+0.1
1,789,281	-				-2.5