Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS06875

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
1,564,198	+				-0.1
1,564,216	+				-0.3
1,564,278	-		HSERO_RS06870	0.16	+0.7
1,564,318	-		HSERO_RS06870	0.20	+0.2
1,564,329	+		HSERO_RS06870	0.21	+1.7
1,564,530	-				-0.0
1,564,530	-		HSERO_RS06870	0.43	+1.1
1,564,790	+		HSERO_RS06870	0.71	-0.6
1,564,793	-		HSERO_RS06870	0.72	+0.1
1,564,839	+				+1.6
1,564,847	+		HSERO_RS06870	0.78	+0.2
1,564,859	+		HSERO_RS06870	0.79	-0.0
1,564,967	+				-0.1
1,565,089	+				+0.7
1,565,256	+				-0.3
1,565,297	-		HSERO_RS06875	0.14	+0.2
1,565,330	-		HSERO_RS06875	0.17	-0.4
1,565,469	-		HSERO_RS06875	0.32	-0.9
1,565,469	-		HSERO_RS06875	0.32	+0.5
1,565,572	-		HSERO_RS06875	0.43	-1.2
1,565,572	-		HSERO_RS06875	0.43	-1.1
1,565,618	+		HSERO_RS06875	0.48	-0.0
1,565,623	+		HSERO_RS06875	0.48	+0.1
1,565,707	-		HSERO_RS06875	0.57	+1.1
1,565,894	+		HSERO_RS06875	0.77	-1.9
1,566,168	+				-0.6
1,566,176	-				+0.2
1,566,310	+		HSERO_RS06880	0.17	-1.3
1,566,310	+		HSERO_RS06880	0.17	-0.7
1,566,493	-		HSERO_RS06880	0.43	+0.1
1,566,625	-				-0.4
1,566,766	+		HSERO_RS06880	0.81	+0.4