Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS06300

Experiment: Sisomicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sisomicin 0.125 mg/ml
1,421,967	+		HSERO_RS06295	0.58	+0.3
1,422,050	-		HSERO_RS06295	0.62	-1.3
1,422,067	+		HSERO_RS06295	0.63	-1.2
1,422,210	+		HSERO_RS06295	0.71	+0.2
1,422,318	+		HSERO_RS06295	0.77	-0.7
1,422,400	-		HSERO_RS06295	0.82	+0.1
1,422,405	-		HSERO_RS06295	0.82	+0.9
1,422,438	-		HSERO_RS06295	0.84	+1.0
1,422,501	-		HSERO_RS06295	0.87	+1.0
1,422,860	+				+0.6
1,422,875	-				+0.7
1,422,933	+				-1.7
1,422,977	+		HSERO_RS06300	0.11	+0.0
1,422,985	-		HSERO_RS06300	0.12	+0.4
1,423,030	+		HSERO_RS06300	0.22	-1.3
1,423,085	-		HSERO_RS06300	0.33	+0.5
1,423,085	-		HSERO_RS06300	0.33	-0.2
1,423,233	+		HSERO_RS06300	0.64	-1.4
1,423,261	-		HSERO_RS06300	0.70	-1.5
1,423,410	-				-0.7
1,423,494	+				-0.4
1,423,631	+				+0.2
1,423,666	+		HSERO_RS06305	0.10	-0.4
1,423,969	-		HSERO_RS06305	0.25	+0.2
1,424,130	-		HSERO_RS06305	0.32	+0.1
1,424,281	-		HSERO_RS06305	0.39	+0.4
1,424,355	+		HSERO_RS06305	0.43	+0.1
1,424,363	-		HSERO_RS06305	0.43	+1.1
1,424,373	-		HSERO_RS06305	0.44	-0.2
1,424,373	-		HSERO_RS06305	0.44	-1.2
1,424,373	-		HSERO_RS06305	0.44	-0.1