Experiment: Sisomicin 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS02730 and HSERO_RS02735 are separated by 2 nucleotides HSERO_RS02735 and HSERO_RS02740 are separated by 56 nucleotides HSERO_RS02740 and HSERO_RS02745 are separated by 112 nucleotides
HSERO_RS02730: HSERO_RS02730 - histidine kinase, at 605,266 to 607,218
_RS02730
HSERO_RS02735: HSERO_RS02735 - hypothetical protein, at 607,221 to 607,580
_RS02735
HSERO_RS02740: HSERO_RS02740 - hypothetical protein, at 607,637 to 608,149
_RS02740
HSERO_RS02745: HSERO_RS02745 - Mn-containing catalase, at 608,262 to 609,164
_RS02745
Position (kb) 607
608
609 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 606.740 kb on + strand, within HSERO_RS02730 at 606.924 kb on - strand, within HSERO_RS02730 at 606.949 kb on + strand, within HSERO_RS02730 at 607.049 kb on - strand at 607.054 kb on + strand at 607.076 kb on + strand at 607.092 kb on + strand at 607.142 kb on - strand at 607.490 kb on + strand, within HSERO_RS02735 at 607.534 kb on - strand, within HSERO_RS02735 at 607.681 kb on - strand at 607.721 kb on + strand, within HSERO_RS02740 at 607.736 kb on - strand, within HSERO_RS02740 at 607.817 kb on - strand, within HSERO_RS02740 at 607.865 kb on - strand, within HSERO_RS02740 at 607.889 kb on - strand, within HSERO_RS02740 at 607.908 kb on - strand, within HSERO_RS02740 at 607.978 kb on - strand, within HSERO_RS02740 at 608.008 kb on + strand, within HSERO_RS02740 at 608.032 kb on + strand, within HSERO_RS02740 at 608.097 kb on + strand, within HSERO_RS02740 at 608.114 kb on - strand at 608.259 kb on - strand at 608.312 kb on - strand at 608.327 kb on - strand at 608.334 kb on + strand at 608.399 kb on - strand, within HSERO_RS02745 at 608.401 kb on + strand, within HSERO_RS02745 at 608.401 kb on + strand, within HSERO_RS02745 at 608.404 kb on - strand, within HSERO_RS02745 at 608.409 kb on - strand, within HSERO_RS02745 at 608.964 kb on + strand, within HSERO_RS02745 at 608.993 kb on - strand, within HSERO_RS02745 at 609.035 kb on - strand, within HSERO_RS02745
Per-strain Table
Position Strand Gene LocusTag Fraction Sisomicin 0.125 mg/ml remove 606,740 + HSERO_RS02730 0.75 -0.9 606,924 - HSERO_RS02730 0.85 +0.8 606,949 + HSERO_RS02730 0.86 -1.4 607,049 - +0.7 607,054 + -1.7 607,076 + +0.2 607,092 + +0.5 607,142 - -2.2 607,490 + HSERO_RS02735 0.75 -1.2 607,534 - HSERO_RS02735 0.87 +0.1 607,681 - -0.3 607,721 + HSERO_RS02740 0.16 -0.6 607,736 - HSERO_RS02740 0.19 -1.7 607,817 - HSERO_RS02740 0.35 +0.3 607,865 - HSERO_RS02740 0.44 -1.1 607,889 - HSERO_RS02740 0.49 -0.9 607,908 - HSERO_RS02740 0.53 +0.2 607,978 - HSERO_RS02740 0.66 +1.2 608,008 + HSERO_RS02740 0.72 +1.1 608,032 + HSERO_RS02740 0.77 -1.4 608,097 + HSERO_RS02740 0.90 -1.6 608,114 - -0.7 608,259 - +0.9 608,312 - +0.6 608,327 - +0.6 608,334 + +0.7 608,399 - HSERO_RS02745 0.15 -4.0 608,401 + HSERO_RS02745 0.15 +0.8 608,401 + HSERO_RS02745 0.15 -1.0 608,404 - HSERO_RS02745 0.16 +0.4 608,409 - HSERO_RS02745 0.16 -2.1 608,964 + HSERO_RS02745 0.78 -0.1 608,993 - HSERO_RS02745 0.81 -0.4 609,035 - HSERO_RS02745 0.86 +0.5
Or see this region's nucleotide sequence