Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16710 and AO356_16715 are separated by 311 nucleotides AO356_16715 and AO356_16720 are separated by 186 nucleotides
AO356_16710: AO356_16710 - cysteine biosynthesis protein CysZ, at 3,769,100 to 3,769,855
_16710
AO356_16715: AO356_16715 - thioredoxin reductase, at 3,770,167 to 3,771,129
_16715
AO356_16720: AO356_16720 - 4-aminobutyrate aminotransferase, at 3,771,316 to 3,772,566
_16720
Position (kb)
3770
3771
3772 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3769.218 kb on + strand, within AO356_16710 at 3769.219 kb on - strand, within AO356_16710 at 3769.320 kb on + strand, within AO356_16710 at 3769.321 kb on - strand, within AO356_16710 at 3769.321 kb on - strand, within AO356_16710 at 3769.321 kb on - strand, within AO356_16710 at 3769.431 kb on + strand, within AO356_16710 at 3769.597 kb on + strand, within AO356_16710 at 3769.597 kb on + strand, within AO356_16710 at 3769.597 kb on + strand, within AO356_16710 at 3769.598 kb on - strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.647 kb on + strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.648 kb on - strand, within AO356_16710 at 3769.725 kb on + strand, within AO356_16710 at 3769.725 kb on + strand, within AO356_16710 at 3769.726 kb on - strand, within AO356_16710 at 3769.726 kb on - strand, within AO356_16710 at 3769.772 kb on + strand, within AO356_16710 at 3769.772 kb on + strand, within AO356_16710 at 3769.773 kb on - strand, within AO356_16710 at 3769.773 kb on - strand, within AO356_16710 at 3769.825 kb on - strand at 3769.855 kb on + strand at 3769.855 kb on + strand at 3769.855 kb on + strand at 3769.855 kb on + strand at 3769.855 kb on + strand at 3769.855 kb on + strand at 3769.856 kb on - strand at 3769.856 kb on - strand at 3769.856 kb on - strand at 3769.931 kb on + strand at 3769.931 kb on + strand at 3769.931 kb on + strand at 3769.932 kb on - strand at 3769.932 kb on - strand at 3769.932 kb on - strand at 3769.932 kb on - strand at 3769.932 kb on - strand at 3769.932 kb on - strand at 3769.932 kb on - strand at 3769.959 kb on + strand at 3769.959 kb on + strand at 3769.960 kb on - strand at 3769.960 kb on - strand at 3769.962 kb on + strand at 3769.963 kb on - strand at 3769.980 kb on + strand at 3769.981 kb on - strand at 3769.991 kb on + strand at 3771.169 kb on - strand at 3771.179 kb on + strand at 3771.180 kb on - strand at 3771.180 kb on - strand at 3771.228 kb on + strand at 3771.228 kb on + strand at 3771.228 kb on + strand at 3771.228 kb on + strand at 3771.229 kb on - strand at 3771.557 kb on + strand, within AO356_16720 at 3771.557 kb on + strand, within AO356_16720 at 3771.557 kb on + strand, within AO356_16720 at 3771.558 kb on - strand, within AO356_16720 at 3771.558 kb on - strand, within AO356_16720 at 3771.565 kb on + strand, within AO356_16720 at 3771.701 kb on + strand, within AO356_16720 at 3771.701 kb on + strand, within AO356_16720 at 3771.702 kb on - strand, within AO356_16720 at 3771.702 kb on - strand, within AO356_16720 at 3772.095 kb on - strand, within AO356_16720 at 3772.095 kb on - strand, within AO356_16720 at 3772.095 kb on - strand, within AO356_16720 at 3772.095 kb on - strand, within AO356_16720 at 3772.095 kb on - strand, within AO356_16720 at 3772.095 kb on - strand, within AO356_16720
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 3,769,218 + AO356_16710 0.16 +0.6 3,769,219 - AO356_16710 0.16 -0.3 3,769,320 + AO356_16710 0.29 -0.3 3,769,321 - AO356_16710 0.29 +0.3 3,769,321 - AO356_16710 0.29 +1.2 3,769,321 - AO356_16710 0.29 -0.2 3,769,431 + AO356_16710 0.44 +0.2 3,769,597 + AO356_16710 0.66 +1.7 3,769,597 + AO356_16710 0.66 -1.8 3,769,597 + AO356_16710 0.66 +0.6 3,769,598 - AO356_16710 0.66 +0.1 3,769,647 + AO356_16710 0.72 +1.0 3,769,647 + AO356_16710 0.72 -0.0 3,769,647 + AO356_16710 0.72 +0.0 3,769,647 + AO356_16710 0.72 +1.5 3,769,647 + AO356_16710 0.72 +0.2 3,769,647 + AO356_16710 0.72 +1.9 3,769,647 + AO356_16710 0.72 -0.9 3,769,647 + AO356_16710 0.72 -0.6 3,769,647 + AO356_16710 0.72 +1.3 3,769,648 - AO356_16710 0.72 +0.0 3,769,648 - AO356_16710 0.72 -0.7 3,769,648 - AO356_16710 0.72 -0.3 3,769,648 - AO356_16710 0.72 +0.2 3,769,648 - AO356_16710 0.72 -0.2 3,769,648 - AO356_16710 0.72 +0.7 3,769,648 - AO356_16710 0.72 +0.7 3,769,648 - AO356_16710 0.72 -0.5 3,769,648 - AO356_16710 0.72 +0.6 3,769,648 - AO356_16710 0.72 +1.0 3,769,648 - AO356_16710 0.72 +0.5 3,769,648 - AO356_16710 0.72 -0.9 3,769,725 + AO356_16710 0.83 -0.1 3,769,725 + AO356_16710 0.83 +0.1 3,769,726 - AO356_16710 0.83 +0.3 3,769,726 - AO356_16710 0.83 +0.7 3,769,772 + AO356_16710 0.89 -0.0 3,769,772 + AO356_16710 0.89 +0.2 3,769,773 - AO356_16710 0.89 +0.1 3,769,773 - AO356_16710 0.89 -0.4 3,769,825 - +0.5 3,769,855 + +0.4 3,769,855 + +0.8 3,769,855 + -0.4 3,769,855 + +0.0 3,769,855 + +1.4 3,769,855 + +0.3 3,769,856 - -0.3 3,769,856 - -1.0 3,769,856 - +1.4 3,769,931 + +0.3 3,769,931 + +0.1 3,769,931 + -0.1 3,769,932 - +0.0 3,769,932 - +0.4 3,769,932 - -0.1 3,769,932 - +0.6 3,769,932 - +0.6 3,769,932 - +1.7 3,769,932 - +0.1 3,769,959 + +0.3 3,769,959 + +0.3 3,769,960 - +0.2 3,769,960 - -0.2 3,769,962 + +0.4 3,769,963 - -0.4 3,769,980 + +0.3 3,769,981 - +0.1 3,769,991 + -0.2 3,771,169 - +0.6 3,771,179 + +0.3 3,771,180 - +0.2 3,771,180 - +0.2 3,771,228 + +0.8 3,771,228 + +0.1 3,771,228 + +0.1 3,771,228 + -0.3 3,771,229 - -0.2 3,771,557 + AO356_16720 0.19 +0.5 3,771,557 + AO356_16720 0.19 +0.5 3,771,557 + AO356_16720 0.19 +0.4 3,771,558 - AO356_16720 0.19 +1.8 3,771,558 - AO356_16720 0.19 +0.9 3,771,565 + AO356_16720 0.20 -0.2 3,771,701 + AO356_16720 0.31 -0.3 3,771,701 + AO356_16720 0.31 +0.8 3,771,702 - AO356_16720 0.31 -1.0 3,771,702 - AO356_16720 0.31 +0.5 3,772,095 - AO356_16720 0.62 +0.1 3,772,095 - AO356_16720 0.62 +1.2 3,772,095 - AO356_16720 0.62 -0.0 3,772,095 - AO356_16720 0.62 +0.8 3,772,095 - AO356_16720 0.62 -0.0 3,772,095 - AO356_16720 0.62 -0.4
Or see this region's nucleotide sequence