Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_04325 and AO356_04330 overlap by 4 nucleotides AO356_04330 and AO356_04335 overlap by 4 nucleotides AO356_04335 and AO356_04340 are separated by 64 nucleotides
AO356_04325: AO356_04325 - allophanate hydrolase, at 985,215 to 986,135
_04325
AO356_04330: AO356_04330 - allophanate hydrolase, at 986,132 to 986,836
_04330
AO356_04335: AO356_04335 - hypothetical protein, at 986,833 to 987,585
_04335
AO356_04340: AO356_04340 - MFS transporter, at 987,650 to 988,936
_04340
Position (kb) 986
987 Strain fitness (log2 ratio) -2
-1
0
1 at 985.174 kb on + strand at 985.174 kb on + strand at 985.174 kb on + strand at 985.175 kb on - strand at 985.175 kb on - strand at 985.175 kb on - strand at 985.175 kb on - strand at 985.175 kb on - strand at 985.175 kb on - strand at 985.175 kb on - strand at 985.175 kb on - strand at 985.175 kb on - strand at 985.178 kb on + strand at 985.178 kb on + strand at 985.178 kb on + strand at 985.178 kb on + strand at 985.179 kb on - strand at 985.179 kb on - strand at 985.179 kb on - strand at 985.179 kb on - strand at 985.179 kb on - strand at 985.179 kb on - strand at 985.179 kb on - strand at 985.439 kb on + strand, within AO356_04325 at 985.440 kb on - strand, within AO356_04325 at 985.440 kb on - strand, within AO356_04325 at 985.468 kb on + strand, within AO356_04325 at 985.670 kb on - strand, within AO356_04325 at 985.795 kb on + strand, within AO356_04325 at 985.887 kb on + strand, within AO356_04325 at 985.888 kb on - strand, within AO356_04325 at 985.949 kb on + strand, within AO356_04325 at 986.235 kb on + strand, within AO356_04330 at 986.235 kb on + strand, within AO356_04330 at 986.408 kb on + strand, within AO356_04330 at 986.408 kb on + strand, within AO356_04330 at 986.457 kb on + strand, within AO356_04330 at 986.457 kb on + strand, within AO356_04330 at 986.550 kb on + strand, within AO356_04330 at 986.664 kb on + strand, within AO356_04330 at 986.664 kb on + strand, within AO356_04330 at 986.685 kb on + strand, within AO356_04330 at 986.685 kb on + strand, within AO356_04330 at 986.685 kb on + strand, within AO356_04330 at 986.919 kb on + strand, within AO356_04335 at 986.919 kb on + strand, within AO356_04335 at 986.920 kb on - strand, within AO356_04335 at 986.920 kb on - strand, within AO356_04335 at 986.920 kb on - strand, within AO356_04335 at 986.920 kb on - strand, within AO356_04335 at 986.920 kb on - strand, within AO356_04335 at 987.108 kb on - strand, within AO356_04335 at 987.179 kb on + strand, within AO356_04335 at 987.180 kb on - strand, within AO356_04335 at 987.239 kb on + strand, within AO356_04335 at 987.239 kb on + strand, within AO356_04335 at 987.240 kb on - strand, within AO356_04335 at 987.240 kb on - strand, within AO356_04335 at 987.240 kb on - strand, within AO356_04335 at 987.263 kb on + strand, within AO356_04335 at 987.317 kb on + strand, within AO356_04335 at 987.350 kb on + strand, within AO356_04335 at 987.350 kb on + strand, within AO356_04335 at 987.350 kb on + strand, within AO356_04335 at 987.350 kb on + strand, within AO356_04335 at 987.351 kb on - strand, within AO356_04335 at 987.351 kb on - strand, within AO356_04335 at 987.390 kb on - strand, within AO356_04335 at 987.572 kb on - strand at 987.601 kb on - strand at 987.617 kb on + strand at 987.617 kb on + strand at 987.644 kb on + strand at 987.651 kb on + strand at 987.652 kb on - strand at 987.652 kb on - strand at 987.717 kb on + strand at 987.775 kb on + strand at 987.776 kb on - strand at 987.823 kb on - strand, within AO356_04340 at 987.823 kb on - strand, within AO356_04340
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 985,174 + -0.5 985,174 + -0.4 985,174 + +1.5 985,175 - +0.8 985,175 - +0.2 985,175 - -1.4 985,175 - -1.0 985,175 - +0.4 985,175 - +0.6 985,175 - -0.7 985,175 - +0.5 985,175 - +0.7 985,178 + +0.2 985,178 + +0.5 985,178 + +0.5 985,178 + +0.2 985,179 - -0.5 985,179 - +1.2 985,179 - +0.2 985,179 - -0.1 985,179 - +1.4 985,179 - +0.2 985,179 - -0.0 985,439 + AO356_04325 0.24 -0.6 985,440 - AO356_04325 0.24 -0.1 985,440 - AO356_04325 0.24 -0.1 985,468 + AO356_04325 0.27 -0.6 985,670 - AO356_04325 0.49 -0.9 985,795 + AO356_04325 0.63 -1.5 985,887 + AO356_04325 0.73 -0.2 985,888 - AO356_04325 0.73 -1.6 985,949 + AO356_04325 0.80 +0.5 986,235 + AO356_04330 0.15 -0.9 986,235 + AO356_04330 0.15 -0.0 986,408 + AO356_04330 0.39 -1.1 986,408 + AO356_04330 0.39 -0.1 986,457 + AO356_04330 0.46 -1.5 986,457 + AO356_04330 0.46 -1.9 986,550 + AO356_04330 0.59 -0.7 986,664 + AO356_04330 0.75 -1.9 986,664 + AO356_04330 0.75 -0.6 986,685 + AO356_04330 0.78 -0.3 986,685 + AO356_04330 0.78 -0.4 986,685 + AO356_04330 0.78 -1.4 986,919 + AO356_04335 0.11 -1.4 986,919 + AO356_04335 0.11 -2.2 986,920 - AO356_04335 0.12 -0.0 986,920 - AO356_04335 0.12 -1.0 986,920 - AO356_04335 0.12 -1.3 986,920 - AO356_04335 0.12 +0.5 986,920 - AO356_04335 0.12 -1.6 987,108 - AO356_04335 0.37 -0.1 987,179 + AO356_04335 0.46 -1.0 987,180 - AO356_04335 0.46 +0.4 987,239 + AO356_04335 0.54 -1.1 987,239 + AO356_04335 0.54 -0.6 987,240 - AO356_04335 0.54 -2.6 987,240 - AO356_04335 0.54 -0.1 987,240 - AO356_04335 0.54 -0.2 987,263 + AO356_04335 0.57 -0.1 987,317 + AO356_04335 0.64 +0.1 987,350 + AO356_04335 0.69 -0.4 987,350 + AO356_04335 0.69 +0.4 987,350 + AO356_04335 0.69 -1.0 987,350 + AO356_04335 0.69 -0.7 987,351 - AO356_04335 0.69 -1.1 987,351 - AO356_04335 0.69 +0.0 987,390 - AO356_04335 0.74 -0.1 987,572 - -0.1 987,601 - -1.7 987,617 + -2.1 987,617 + -0.1 987,644 + +0.9 987,651 + -0.3 987,652 - -0.2 987,652 - +0.4 987,717 + +0.2 987,775 + +0.5 987,776 - -0.9 987,823 - AO356_04340 0.13 +0.9 987,823 - AO356_04340 0.13 +1.1
Or see this region's nucleotide sequence