Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS07675

Experiment: H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE
1,404,452	+		MMJJ_RS07670	0.17	-1.3
1,404,465	-		MMJJ_RS07670	0.18	+1.6
1,404,479	+		MMJJ_RS07670	0.19	-0.6
1,404,506	-		MMJJ_RS07670	0.22	-1.3
1,404,507	+		MMJJ_RS07670	0.22	-0.8
1,404,507	+		MMJJ_RS07670	0.22	-0.7
1,404,510	-		MMJJ_RS07670	0.22	-0.9
1,404,510	-		MMJJ_RS07670	0.22	+0.3
1,404,511	+		MMJJ_RS07670	0.22	-0.6
1,404,589	-		MMJJ_RS07670	0.29	-0.5
1,404,605	-		MMJJ_RS07670	0.30	-0.7
1,404,605	-		MMJJ_RS07670	0.30	-1.5
1,404,606	+		MMJJ_RS07670	0.30	+0.5
1,404,606	+		MMJJ_RS07670	0.30	+1.2
1,404,606	+		MMJJ_RS07670	0.30	+1.1
1,404,606	+		MMJJ_RS07670	0.30	+0.9
1,404,669	-		MMJJ_RS07670	0.36	-0.8
1,404,675	+		MMJJ_RS07670	0.36	-0.6
1,404,681	-		MMJJ_RS07670	0.37	+2.3
1,404,682	+		MMJJ_RS07670	0.37	-1.1
1,404,682	+		MMJJ_RS07670	0.37	+1.2
1,404,700	+		MMJJ_RS07670	0.38	+1.1
1,404,700	+		MMJJ_RS07670	0.38	-0.3
1,404,721	-		MMJJ_RS07670	0.40	-1.2
1,404,721	-		MMJJ_RS07670	0.40	-0.6
1,404,722	+		MMJJ_RS07670	0.40	+0.5
1,404,722	+				+3.2
1,404,727	-		MMJJ_RS07670	0.41	+1.3
1,404,728	+		MMJJ_RS07670	0.41	+0.6
1,404,728	+		MMJJ_RS07670	0.41	-0.2
1,404,729	-		MMJJ_RS07670	0.41	+1.0
1,404,805	+		MMJJ_RS07670	0.47	-2.5
1,404,847	-		MMJJ_RS07670	0.51	-0.7
1,404,893	-		MMJJ_RS07670	0.55	+0.6
1,404,894	+		MMJJ_RS07670	0.55	-1.5
1,404,894	+		MMJJ_RS07670	0.55	+0.6
1,404,895	-		MMJJ_RS07670	0.55	-1.2
1,404,909	-		MMJJ_RS07670	0.56	+1.3
1,404,910	+		MMJJ_RS07670	0.56	-0.7
1,404,959	-		MMJJ_RS07670	0.61	+0.1
1,404,959	-		MMJJ_RS07670	0.61	+0.9
1,404,962	+		MMJJ_RS07670	0.61	+0.1
1,405,093	-		MMJJ_RS07670	0.72	+0.3
1,405,094	+		MMJJ_RS07670	0.72	-0.0
1,405,106	+		MMJJ_RS07670	0.73	+0.6
1,405,106	+		MMJJ_RS07670	0.73	+0.3
1,405,112	+		MMJJ_RS07670	0.74	+0.6
1,405,114	+		MMJJ_RS07670	0.74	-0.3
1,405,129	-		MMJJ_RS07670	0.75	+0.3
1,405,130	+		MMJJ_RS07670	0.75	-1.4
1,405,137	-		MMJJ_RS07670	0.76	-1.2
1,405,137	-		MMJJ_RS07670	0.76	+1.5
1,405,137	-		MMJJ_RS07670	0.76	+0.9
1,405,137	-		MMJJ_RS07670	0.76	-1.5
1,405,138	+		MMJJ_RS07670	0.76	-0.9
1,405,138	+		MMJJ_RS07670	0.76	+1.1
1,405,138	+		MMJJ_RS07670	0.76	-0.1
1,405,138	+		MMJJ_RS07670	0.76	-1.4
1,405,138	+		MMJJ_RS07670	0.76	+1.8
1,405,138	+		MMJJ_RS07670	0.76	+1.6
1,405,147	+		MMJJ_RS07670	0.77	+0.9
1,405,172	+		MMJJ_RS07670	0.79	-1.8
1,405,231	-		MMJJ_RS07670	0.84	-0.5
1,405,261	+		MMJJ_RS07670	0.87	-0.9
1,405,284	-		MMJJ_RS07670	0.88	-0.6
1,405,284	-		MMJJ_RS07670	0.88	+1.5
1,405,285	+		MMJJ_RS07670	0.89	-0.1
1,405,285	+		MMJJ_RS07670	0.89	-0.6
1,405,285	+		MMJJ_RS07670	0.89	+0.6
1,405,285	+		MMJJ_RS07670	0.89	-0.3
1,405,314	-				+1.2
1,405,425	+				+2.0
1,405,428	+				+0.4
1,405,431	-				-0.6
1,405,470	+				-1.9
1,405,545	+				-3.1
1,405,596	+		MMJJ_RS07675	0.12	-4.6
1,405,604	-		MMJJ_RS07675	0.12	-2.6
1,405,622	+		MMJJ_RS07675	0.14	-4.1
1,405,622	+		MMJJ_RS07675	0.14	-5.1
1,405,742	-		MMJJ_RS07675	0.22	-2.9
1,405,743	+		MMJJ_RS07675	0.22	-4.7
1,405,743	+		MMJJ_RS07675	0.22	-3.1
1,405,767	-		MMJJ_RS07675	0.24	-1.6
1,405,767	-		MMJJ_RS07675	0.24	-4.8
1,405,767	-		MMJJ_RS07675	0.24	-0.7
1,405,767	-		MMJJ_RS07675	0.24	-3.3
1,405,768	+		MMJJ_RS07675	0.24	-1.7
1,405,768	+		MMJJ_RS07675	0.24	-3.8
1,405,772	-		MMJJ_RS07675	0.25	-3.9
1,405,772	-		MMJJ_RS07675	0.25	-2.6
1,405,773	+				-0.0
1,405,773	+		MMJJ_RS07675	0.25	-2.3
1,405,773	+		MMJJ_RS07675	0.25	-3.6
1,405,776	-		MMJJ_RS07675	0.25	-2.6
1,405,776	-		MMJJ_RS07675	0.25	-4.6
1,405,777	+		MMJJ_RS07675	0.25	-1.8
1,405,777	+		MMJJ_RS07675	0.25	-4.2
1,405,777	+		MMJJ_RS07675	0.25	-3.6
1,405,777	+		MMJJ_RS07675	0.25	-2.1
1,405,777	+		MMJJ_RS07675	0.25	-1.7
1,405,780	+		MMJJ_RS07675	0.25	-0.6
1,405,786	-		MMJJ_RS07675	0.26	-3.1
1,405,786	-		MMJJ_RS07675	0.26	-4.2
1,405,786	-		MMJJ_RS07675	0.26	-2.8
1,405,786	-		MMJJ_RS07675	0.26	-4.0
1,405,786	-		MMJJ_RS07675	0.26	-4.7
1,405,786	-		MMJJ_RS07675	0.26	-3.6
1,405,786	-		MMJJ_RS07675	0.26	-3.4
1,405,786	-		MMJJ_RS07675	0.26	-4.3
1,405,786	-		MMJJ_RS07675	0.26	-4.0
1,405,786	-		MMJJ_RS07675	0.26	+0.3
1,405,786	-		MMJJ_RS07675	0.26	-1.4
1,405,786	-		MMJJ_RS07675	0.26	-5.1
1,405,786	-		MMJJ_RS07675	0.26	-2.7
1,405,787	+		MMJJ_RS07675	0.26	-3.3
1,405,787	+		MMJJ_RS07675	0.26	-1.6
1,405,787	+		MMJJ_RS07675	0.26	-4.6
1,405,787	+		MMJJ_RS07675	0.26	-4.0
1,405,787	+		MMJJ_RS07675	0.26	-4.8
1,405,787	+		MMJJ_RS07675	0.26	-4.7
1,405,787	+				+0.6
1,405,787	+		MMJJ_RS07675	0.26	-0.7
1,405,791	+		MMJJ_RS07675	0.26	-3.0
1,405,805	-		MMJJ_RS07675	0.27	-2.2
1,405,806	+		MMJJ_RS07675	0.27	-4.5
1,405,826	-		MMJJ_RS07675	0.28	-3.9
1,405,826	-		MMJJ_RS07675	0.28	-4.1
1,405,827	+		MMJJ_RS07675	0.29	-4.0
1,405,859	+		MMJJ_RS07675	0.31	-1.9
1,405,883	-		MMJJ_RS07675	0.33	-4.5
1,405,884	+		MMJJ_RS07675	0.33	-2.1
1,405,884	+		MMJJ_RS07675	0.33	-0.4
1,405,884	+		MMJJ_RS07675	0.33	-3.8
1,405,898	-		MMJJ_RS07675	0.34	-4.0
1,405,898	-		MMJJ_RS07675	0.34	-1.4
1,405,899	+		MMJJ_RS07675	0.34	-4.0
1,405,899	+		MMJJ_RS07675	0.34	-3.2
1,405,899	+		MMJJ_RS07675	0.34	-3.2
1,405,911	+		MMJJ_RS07675	0.35	-4.2
1,405,911	+		MMJJ_RS07675	0.35	-4.2
1,406,079	+		MMJJ_RS07675	0.47	-2.1
1,406,079	+		MMJJ_RS07675	0.47	-1.2
1,406,236	-		MMJJ_RS07675	0.58	-3.1
1,406,237	+		MMJJ_RS07675	0.58	-3.8
1,406,259	+		MMJJ_RS07675	0.60	-1.6
1,406,259	+		MMJJ_RS07675	0.60	-4.3
1,406,261	+		MMJJ_RS07675	0.60	-3.1
1,406,323	-		MMJJ_RS07675	0.64	-1.8
1,406,408	+		MMJJ_RS07675	0.70	-4.4
1,406,499	+		MMJJ_RS07675	0.77	-3.5
1,406,532	-		MMJJ_RS07675	0.79	-4.1
1,406,532	-		MMJJ_RS07675	0.79	-3.4
1,406,555	+		MMJJ_RS07675	0.81	-5.0
1,406,680	-		MMJJ_RS07675	0.90	-5.2
1,406,709	+				-2.3
1,406,745	+				-3.6
1,406,759	-				-2.7
1,406,759	-				-2.7
1,406,760	+				-3.1
1,406,760	+				-3.2
1,406,765	+				-2.9
1,406,766	-				-3.3
1,406,766	-				-4.1
1,406,767	+				-2.7
1,406,767	+				-2.4
1,406,767	+				-1.7
1,406,822	+				-1.9
1,406,825	-				-3.1
1,406,841	+				-3.4
1,406,857	-				-1.4
1,406,858	+				-1.5
1,406,859	-				-2.3
1,406,859	-				-1.5
1,406,859	-				-1.0
1,406,860	+				-3.9
1,406,860	+				-3.5
1,406,860	+				-3.0
1,406,863	+				-2.0
1,406,864	-				-2.7
1,406,865	+				-3.6
1,406,875	-				-2.8
1,406,876	+				-1.5
1,406,876	+				-2.3
1,406,876	+				-1.1
1,406,880	+				-1.0
1,406,880	+				-4.1
1,406,892	+				-3.7
1,406,927	+				-2.0
1,407,082	+		MMJJ_RS07680	0.18	-2.7
1,407,110	+		MMJJ_RS07680	0.20	-3.5
1,407,120	-		MMJJ_RS07680	0.21	-3.3
1,407,121	+		MMJJ_RS07680	0.21	-1.5
1,407,124	-		MMJJ_RS07680	0.21	-2.9
1,407,190	+		MMJJ_RS07680	0.26	+0.3
1,407,192	+		MMJJ_RS07680	0.26	+1.3
1,407,195	-		MMJJ_RS07680	0.27	-0.9
1,407,195	-		MMJJ_RS07680	0.27	-4.4
1,407,200	+		MMJJ_RS07680	0.27	-3.7
1,407,240	-		MMJJ_RS07680	0.30	-0.0
1,407,242	-		MMJJ_RS07680	0.30	-1.6
1,407,243	+		MMJJ_RS07680	0.30	-2.2
1,407,243	+		MMJJ_RS07680	0.30	-2.7
1,407,251	+		MMJJ_RS07680	0.31	-1.7
1,407,251	+		MMJJ_RS07680	0.31	-0.2
1,407,251	+		MMJJ_RS07680	0.31	-3.5
1,407,374	-		MMJJ_RS07680	0.40	-1.0
1,407,375	+		MMJJ_RS07680	0.40	-1.2
1,407,411	+		MMJJ_RS07680	0.43	-3.9
1,407,414	-		MMJJ_RS07680	0.43	-2.2
1,407,414	-		MMJJ_RS07680	0.43	-2.6
1,407,414	-		MMJJ_RS07680	0.43	-2.3
1,407,459	-		MMJJ_RS07680	0.47	-2.4
1,407,517	+		MMJJ_RS07680	0.51	-1.6
1,407,520	-		MMJJ_RS07680	0.51	-0.4
1,407,520	-		MMJJ_RS07680	0.51	+0.8
1,407,521	+		MMJJ_RS07680	0.51	-0.0
1,407,521	+		MMJJ_RS07680	0.51	-3.2
1,407,521	+		MMJJ_RS07680	0.51	-3.1
1,407,528	-		MMJJ_RS07680	0.52	-1.7
1,407,529	+		MMJJ_RS07680	0.52	-3.8
1,407,560	+		MMJJ_RS07680	0.54	-2.3
1,407,581	+		MMJJ_RS07680	0.56	-0.0
1,407,751	+		MMJJ_RS07680	0.69	-0.7
1,407,754	-		MMJJ_RS07680	0.69	-1.6
1,407,755	+		MMJJ_RS07680	0.69	-0.7
1,407,798	-		MMJJ_RS07680	0.72	-2.8
1,407,799	+		MMJJ_RS07680	0.72	-1.2