Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS13565

Experiment: R2A pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A pH7
3,034,201	+		LRK54_RS13560	0.17	-0.0
3,034,201	+		LRK54_RS13560	0.17	+2.6
3,034,202	-		LRK54_RS13560	0.18	-0.4
3,034,261	+		LRK54_RS13560	0.23	+0.8
3,034,261	+		LRK54_RS13560	0.23	-1.0
3,034,261	+		LRK54_RS13560	0.23	+0.3
3,034,261	+		LRK54_RS13560	0.23	+1.8
3,034,261	+		LRK54_RS13560	0.23	+0.3
3,034,261	+		LRK54_RS13560	0.23	+0.2
3,034,261	+		LRK54_RS13560	0.23	-0.5
3,034,261	+		LRK54_RS13560	0.23	-0.2
3,034,262	-		LRK54_RS13560	0.23	+1.2
3,034,262	-		LRK54_RS13560	0.23	-0.3
3,034,262	-		LRK54_RS13560	0.23	+0.3
3,034,262	-		LRK54_RS13560	0.23	-0.2
3,034,262	-		LRK54_RS13560	0.23	+0.9
3,034,262	-		LRK54_RS13560	0.23	+0.0
3,034,262	-		LRK54_RS13560	0.23	+0.5
3,034,262	-		LRK54_RS13560	0.23	+1.0
3,034,262	-		LRK54_RS13560	0.23	+0.2
3,034,262	-		LRK54_RS13560	0.23	+0.2
3,034,262	-		LRK54_RS13560	0.23	+0.3
3,034,633	+		LRK54_RS13560	0.55	-0.3
3,034,633	+		LRK54_RS13560	0.55	-0.9
3,034,633	+		LRK54_RS13560	0.55	+0.8
3,034,633	+		LRK54_RS13560	0.55	+0.8
3,034,634	-		LRK54_RS13560	0.55	-0.1
3,034,634	-		LRK54_RS13560	0.55	-0.0
3,034,634	-		LRK54_RS13560	0.55	+0.3
3,034,634	-		LRK54_RS13560	0.55	+0.8
3,034,634	-		LRK54_RS13560	0.55	-0.2
3,034,634	-		LRK54_RS13560	0.55	+0.6
3,034,634	-		LRK54_RS13560	0.55	-0.5
3,034,634	-		LRK54_RS13560	0.55	+0.6
3,034,634	-		LRK54_RS13560	0.55	-0.4
3,034,837	+		LRK54_RS13560	0.73	+0.3
3,034,837	+		LRK54_RS13560	0.73	+0.3
3,034,969	+		LRK54_RS13560	0.85	+0.3
3,034,969	+		LRK54_RS13560	0.85	-0.3
3,034,969	+		LRK54_RS13560	0.85	+0.4
3,034,969	+		LRK54_RS13560	0.85	+1.3
3,034,969	+		LRK54_RS13560	0.85	-0.2
3,034,969	+		LRK54_RS13560	0.85	+2.3
3,034,969	+		LRK54_RS13560	0.85	+0.3
3,034,969	+		LRK54_RS13560	0.85	-1.4
3,034,969	+		LRK54_RS13560	0.85	-0.0
3,034,969	+		LRK54_RS13560	0.85	-0.8
3,034,969	+		LRK54_RS13560	0.85	-0.9
3,034,969	+		LRK54_RS13560	0.85	-0.5
3,034,969	+		LRK54_RS13560	0.85	+0.6
3,034,969	+		LRK54_RS13560	0.85	+0.3
3,034,969	+		LRK54_RS13560	0.85	-0.0
3,034,969	+		LRK54_RS13560	0.85	+0.8
3,034,969	+		LRK54_RS13560	0.85	-0.2
3,034,969	+		LRK54_RS13560	0.85	-0.0
3,034,969	+		LRK54_RS13560	0.85	-1.2
3,034,969	+		LRK54_RS13560	0.85	-0.8
3,034,969	+		LRK54_RS13560	0.85	+0.1
3,034,969	+		LRK54_RS13560	0.85	+1.4
3,034,969	+		LRK54_RS13560	0.85	+1.0
3,034,969	+		LRK54_RS13560	0.85	+1.0
3,034,969	+		LRK54_RS13560	0.85	-0.7
3,034,969	+		LRK54_RS13560	0.85	-0.3
3,034,969	+		LRK54_RS13560	0.85	+0.1
3,034,969	+		LRK54_RS13560	0.85	+0.2
3,034,969	+		LRK54_RS13560	0.85	-0.8
3,034,969	+		LRK54_RS13560	0.85	+0.7
3,034,969	+		LRK54_RS13560	0.85	-0.1
3,034,969	+		LRK54_RS13560	0.85	-1.7
3,034,970	-		LRK54_RS13560	0.85	+0.4
3,034,970	-		LRK54_RS13560	0.85	-0.5
3,034,970	-		LRK54_RS13560	0.85	-0.2
3,034,970	-		LRK54_RS13560	0.85	-0.0
3,034,970	-		LRK54_RS13560	0.85	-0.7
3,034,970	-		LRK54_RS13560	0.85	+0.5
3,034,970	-		LRK54_RS13560	0.85	-0.8
3,034,970	-		LRK54_RS13560	0.85	+0.5
3,034,970	-		LRK54_RS13560	0.85	-1.6
3,034,970	-		LRK54_RS13560	0.85	+1.7
3,034,970	-		LRK54_RS13560	0.85	-0.1
3,034,970	-		LRK54_RS13560	0.85	-1.7
3,034,970	-		LRK54_RS13560	0.85	-0.4
3,034,970	-		LRK54_RS13560	0.85	-0.8
3,034,970	-		LRK54_RS13560	0.85	+0.6
3,034,970	-		LRK54_RS13560	0.85	+0.9
3,034,970	-		LRK54_RS13560	0.85	+0.7
3,034,970	-		LRK54_RS13560	0.85	+1.9
3,034,970	-		LRK54_RS13560	0.85	-0.2
3,034,970	-		LRK54_RS13560	0.85	-0.4
3,035,011	+		LRK54_RS13560	0.89	-0.1
3,035,011	+		LRK54_RS13560	0.89	+0.7
3,035,011	+		LRK54_RS13560	0.89	+0.4
3,035,011	+		LRK54_RS13560	0.89	+2.3
3,035,011	+		LRK54_RS13560	0.89	+0.2
3,035,011	+		LRK54_RS13560	0.89	-0.7
3,035,011	+		LRK54_RS13560	0.89	-0.4
3,035,012	-		LRK54_RS13560	0.89	+0.7
3,035,012	-		LRK54_RS13560	0.89	+0.0
3,035,012	-		LRK54_RS13560	0.89	+0.2
3,035,012	-		LRK54_RS13560	0.89	+0.7
3,035,012	-		LRK54_RS13560	0.89	-0.1
3,035,012	-		LRK54_RS13560	0.89	+0.9
3,035,012	-		LRK54_RS13560	0.89	+0.2
3,035,012	-		LRK54_RS13560	0.89	-0.8
3,035,012	-		LRK54_RS13560	0.89	+0.3
3,035,038	+				-1.5
3,035,038	+				+0.0
3,035,038	+				-2.2
3,035,038	+				-0.5
3,035,038	+				-0.1
3,035,038	+				+0.5
3,035,038	+				+1.3
3,035,038	+				+1.3
3,035,038	+				+1.3
3,035,038	+				+1.3
3,035,038	+				+0.5
3,035,038	+				+0.2
3,035,039	-				+0.8
3,035,039	-				+0.3
3,035,039	-				+0.6
3,035,039	-				-0.0
3,035,039	-				+2.3
3,035,039	-				+0.2
3,035,039	-				+0.1
3,035,039	-				+0.4
3,035,039	-				-1.4
3,035,039	-				+0.1
3,035,039	-				-0.5
3,035,039	-				+0.5
3,035,044	+				-0.2
3,035,044	+				+0.5
3,035,044	+				+1.3
3,035,044	+				-1.6
3,035,045	-				-0.5
3,035,045	-				+0.4
3,035,045	-				+0.5
3,035,128	+				-1.0
3,035,129	-				-0.4
3,035,138	-				+0.5
3,035,138	-				-0.2
3,035,171	+				-0.1
3,035,171	+				+0.0
3,035,171	+				+1.3
3,035,171	+				+0.1
3,035,171	+				-0.3
3,035,171	+				-0.6
3,035,171	+				-0.4
3,035,171	+				+0.0
3,035,171	+				+1.3
3,035,171	+				+0.5
3,035,171	+				-0.5
3,035,171	+				+1.2
3,035,171	+				-0.4
3,035,171	+				+0.4
3,035,171	+				+0.1
3,035,172	-				-0.4
3,035,172	-				+1.8
3,035,172	-				+0.6
3,035,172	-				+0.3
3,035,172	-				+0.5
3,035,172	-				-0.7
3,035,172	-				-0.9
3,035,172	-				-0.5
3,035,172	-				+0.7
3,035,172	-				-0.1
3,035,172	-				-0.0
3,035,172	-				+1.3
3,035,172	-				+0.3
3,035,172	-				+0.8
3,035,172	-				-0.3
3,035,172	-				-1.0
3,035,172	-				+0.0
3,035,172	-				+0.8
3,035,172	-				+0.0
3,035,205	+				+0.6
3,035,205	+				+1.4
3,035,206	-				+0.0
3,035,206	-				-0.8
3,035,332	+				+0.7
3,035,332	+				+0.2
3,035,332	+				-0.9
3,035,332	+				+1.6
3,035,332	+				+0.5
3,035,332	+				+0.1
3,035,332	+				+0.2
3,035,332	+				+0.6
3,035,333	-				+1.1
3,035,333	-				-1.8
3,035,333	-				+1.1
3,035,333	-				-1.6
3,035,333	-				-0.5
3,035,333	-				-1.4
3,035,333	-				+2.6
3,035,333	-				-0.3
3,035,333	-				-0.1
3,035,333	-				-0.1
3,035,725	+		LRK54_RS13565	0.27	+2.3
3,035,725	+		LRK54_RS13565	0.27	-0.2
3,035,725	+		LRK54_RS13565	0.27	+0.7
3,035,726	-		LRK54_RS13565	0.27	-0.2
3,035,726	-		LRK54_RS13565	0.27	+1.5
3,035,726	-		LRK54_RS13565	0.27	-0.4
3,035,726	-		LRK54_RS13565	0.27	+0.3
3,035,726	-		LRK54_RS13565	0.27	-0.3
3,035,726	-		LRK54_RS13565	0.27	-0.7
3,035,726	-		LRK54_RS13565	0.27	+1.0
3,035,866	+		LRK54_RS13565	0.34	+0.3
3,035,866	+		LRK54_RS13565	0.34	+0.1
3,035,866	+		LRK54_RS13565	0.34	+1.0
3,035,866	+		LRK54_RS13565	0.34	-1.5
3,035,866	+		LRK54_RS13565	0.34	+0.9
3,035,866	+		LRK54_RS13565	0.34	-0.5
3,035,866	+		LRK54_RS13565	0.34	+0.3
3,035,866	+		LRK54_RS13565	0.34	+0.2
3,035,866	+		LRK54_RS13565	0.34	+0.0
3,035,866	+		LRK54_RS13565	0.34	-0.6
3,035,866	+		LRK54_RS13565	0.34	-0.8
3,035,866	+		LRK54_RS13565	0.34	+0.2
3,035,866	+		LRK54_RS13565	0.34	+1.0
3,035,866	+		LRK54_RS13565	0.34	-0.4
3,035,866	+		LRK54_RS13565	0.34	-0.2
3,035,866	+		LRK54_RS13565	0.34	+0.2
3,035,866	+		LRK54_RS13565	0.34	+0.4
3,035,866	+		LRK54_RS13565	0.34	+1.0
3,035,866	+		LRK54_RS13565	0.34	+0.7
3,035,866	+		LRK54_RS13565	0.34	-0.2
3,035,866	+		LRK54_RS13565	0.34	+1.2
3,035,866	+		LRK54_RS13565	0.34	+0.6
3,035,866	+		LRK54_RS13565	0.34	-0.2
3,035,866	+		LRK54_RS13565	0.34	+0.6
3,035,866	+		LRK54_RS13565	0.34	-0.3
3,035,866	+		LRK54_RS13565	0.34	+0.1
3,035,866	+		LRK54_RS13565	0.34	-1.0
3,035,866	+		LRK54_RS13565	0.34	+0.1
3,035,866	+		LRK54_RS13565	0.34	-0.6
3,035,867	-		LRK54_RS13565	0.34	+0.3
3,035,867	-		LRK54_RS13565	0.34	-0.3
3,035,867	-		LRK54_RS13565	0.34	-0.2
3,035,867	-		LRK54_RS13565	0.34	+0.4
3,035,867	-		LRK54_RS13565	0.34	+0.9
3,035,867	-		LRK54_RS13565	0.34	+0.0
3,035,867	-		LRK54_RS13565	0.34	+0.1
3,035,867	-		LRK54_RS13565	0.34	+1.0
3,035,867	-		LRK54_RS13565	0.34	-0.2
3,035,867	-		LRK54_RS13565	0.34	+0.6
3,035,867	-		LRK54_RS13565	0.34	-0.5
3,035,867	-		LRK54_RS13565	0.34	+0.7
3,035,867	-		LRK54_RS13565	0.34	-0.5
3,035,867	-		LRK54_RS13565	0.34	+0.3
3,035,867	-		LRK54_RS13565	0.34	-0.1
3,035,867	-		LRK54_RS13565	0.34	-0.7
3,035,867	-		LRK54_RS13565	0.34	+0.2
3,035,867	-		LRK54_RS13565	0.34	+0.4
3,035,867	-		LRK54_RS13565	0.34	+2.3
3,035,867	-		LRK54_RS13565	0.34	+0.7
3,035,868	+		LRK54_RS13565	0.34	+0.5
3,035,868	+		LRK54_RS13565	0.34	-1.5
3,035,868	+		LRK54_RS13565	0.34	-1.4
3,035,868	+		LRK54_RS13565	0.34	-0.8
3,035,868	+		LRK54_RS13565	0.34	+0.8
3,035,868	+		LRK54_RS13565	0.34	+1.0
3,035,868	+		LRK54_RS13565	0.34	+1.2
3,035,868	+		LRK54_RS13565	0.34	-0.5
3,035,868	+		LRK54_RS13565	0.34	+0.3
3,035,868	+		LRK54_RS13565	0.34	-0.1
3,035,868	+		LRK54_RS13565	0.34	+0.7
3,035,869	-		LRK54_RS13565	0.34	-1.6
3,035,869	-		LRK54_RS13565	0.34	+0.3
3,035,869	-		LRK54_RS13565	0.34	-0.6
3,035,869	-		LRK54_RS13565	0.34	+1.2
3,035,869	-		LRK54_RS13565	0.34	+0.3
3,035,869	-		LRK54_RS13565	0.34	+0.5
3,035,869	-		LRK54_RS13565	0.34	+0.1
3,035,869	-		LRK54_RS13565	0.34	+0.9
3,035,869	-		LRK54_RS13565	0.34	+0.3
3,035,869	-		LRK54_RS13565	0.34	+0.2
3,035,869	-		LRK54_RS13565	0.34	+1.0
3,035,869	-		LRK54_RS13565	0.34	-0.3
3,035,869	-		LRK54_RS13565	0.34	+1.3
3,036,395	+		LRK54_RS13565	0.59	-0.1
3,036,395	+		LRK54_RS13565	0.59	+0.8
3,036,395	+		LRK54_RS13565	0.59	+0.4
3,036,395	+		LRK54_RS13565	0.59	+0.2
3,036,395	+		LRK54_RS13565	0.59	+1.1
3,036,396	-		LRK54_RS13565	0.59	+0.8
3,036,396	-		LRK54_RS13565	0.59	+0.2
3,036,396	-		LRK54_RS13565	0.59	-1.0
3,036,409	+		LRK54_RS13565	0.60	-1.1
3,036,409	+		LRK54_RS13565	0.60	+0.2
3,036,409	+		LRK54_RS13565	0.60	+1.3
3,036,410	-		LRK54_RS13565	0.60	-0.6
3,036,586	+		LRK54_RS13565	0.68	-0.1
3,036,586	+		LRK54_RS13565	0.68	-1.4
3,036,586	+		LRK54_RS13565	0.68	+0.1
3,036,586	+		LRK54_RS13565	0.68	+1.0
3,036,586	+		LRK54_RS13565	0.68	-0.4
3,036,586	+		LRK54_RS13565	0.68	-0.8
3,036,586	+		LRK54_RS13565	0.68	+1.3
3,036,586	+		LRK54_RS13565	0.68	+0.4
3,036,587	-		LRK54_RS13565	0.68	+0.7
3,036,587	-		LRK54_RS13565	0.68	+0.7
3,036,587	-		LRK54_RS13565	0.68	+0.2
3,036,587	-		LRK54_RS13565	0.68	-1.2
3,036,587	-		LRK54_RS13565	0.68	+0.7
3,036,587	-		LRK54_RS13565	0.68	+0.2
3,036,587	-		LRK54_RS13565	0.68	-1.6
3,036,587	-		LRK54_RS13565	0.68	+1.3
3,036,592	+		LRK54_RS13565	0.69	+0.3
3,036,592	+		LRK54_RS13565	0.69	-0.8
3,036,592	+		LRK54_RS13565	0.69	-0.1
3,036,592	+		LRK54_RS13565	0.69	+1.1
3,036,592	+		LRK54_RS13565	0.69	+0.4
3,036,593	-		LRK54_RS13565	0.69	-0.8
3,036,593	-		LRK54_RS13565	0.69	+1.1
3,037,184	+				-0.3
3,037,184	+				+0.6
3,037,184	+				-0.5
3,037,184	+				+0.1
3,037,184	+				-1.1
3,037,184	+				+0.2
3,037,185	-				+0.2
3,037,185	-				-0.3
3,037,185	-				+1.1
3,037,185	-				-1.4
3,037,185	-				-0.5
3,037,185	-				+1.2
3,037,192	+				+0.1
3,037,192	+				+0.8
3,037,192	+				+0.0
3,037,192	+				-0.1
3,037,192	+				+1.3
3,037,192	+				-0.2
3,037,192	+				+0.3
3,037,192	+				+0.6
3,037,192	+				-0.2
3,037,192	+				-0.7
3,037,192	+				+3.0
3,037,192	+				-0.0
3,037,193	-				+0.4
3,037,193	-				-0.3
3,037,193	-				+1.3
3,037,193	-				+0.3
3,037,193	-				+0.3
3,037,193	-				-0.7
3,037,193	-				+0.1
3,037,193	-				+0.1
3,037,193	-				-0.4
3,037,496	+		LRK54_RS13570	0.11	+0.6
3,037,496	+		LRK54_RS13570	0.11	-0.5
3,037,497	-		LRK54_RS13570	0.11	+0.5
3,037,901	+		LRK54_RS13570	0.43	+0.0
3,037,901	+		LRK54_RS13570	0.43	-1.0
3,037,901	+		LRK54_RS13570	0.43	-0.4
3,037,902	-		LRK54_RS13570	0.43	-0.1
3,037,902	-		LRK54_RS13570	0.43	-0.9
3,037,902	-		LRK54_RS13570	0.43	-1.5
3,038,123	+		LRK54_RS13570	0.61	-0.1
3,038,123	+		LRK54_RS13570	0.61	+0.9
3,038,124	-		LRK54_RS13570	0.61	+0.4
3,038,150	+		LRK54_RS13570	0.63	+0.3
3,038,159	+		LRK54_RS13570	0.64	-0.3
3,038,160	-		LRK54_RS13570	0.64	-0.7
3,038,160	-		LRK54_RS13570	0.64	+0.2
3,038,160	-		LRK54_RS13570	0.64	+0.1
3,038,160	-		LRK54_RS13570	0.64	+2.0
3,038,160	-		LRK54_RS13570	0.64	+0.3
3,038,160	-		LRK54_RS13570	0.64	-1.5
3,038,160	-		LRK54_RS13570	0.64	+1.1
3,038,209	+		LRK54_RS13570	0.68	-0.3
3,038,209	+		LRK54_RS13570	0.68	-1.3
3,038,209	+		LRK54_RS13570	0.68	+1.0
3,038,210	-		LRK54_RS13570	0.68	+0.8
3,038,210	-		LRK54_RS13570	0.68	-0.4
3,038,210	-		LRK54_RS13570	0.68	+0.2
3,038,210	-		LRK54_RS13570	0.68	+0.4
3,038,210	-		LRK54_RS13570	0.68	+0.1
3,038,210	-		LRK54_RS13570	0.68	-0.2