Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09745

Experiment: R2A pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A pH7
2,127,732	+		LRK54_RS09735	0.82	+0.8
2,127,732	+		LRK54_RS09735	0.82	-0.7
2,127,732	+		LRK54_RS09735	0.82	+0.3
2,127,733	-		LRK54_RS09735	0.83	+0.9
2,127,733	-		LRK54_RS09735	0.83	-0.1
2,127,733	-		LRK54_RS09735	0.83	-1.5
2,127,733	-		LRK54_RS09735	0.83	-0.2
2,127,895	+		LRK54_RS09740	0.12	-0.4
2,127,896	-		LRK54_RS09740	0.12	+0.4
2,127,910	+		LRK54_RS09740	0.13	-0.7
2,127,910	+		LRK54_RS09740	0.13	-1.2
2,127,910	+		LRK54_RS09740	0.13	-1.4
2,127,910	+		LRK54_RS09740	0.13	-0.1
2,127,910	+		LRK54_RS09740	0.13	+0.3
2,127,910	+		LRK54_RS09740	0.13	-1.7
2,127,910	+		LRK54_RS09740	0.13	-0.0
2,127,910	+		LRK54_RS09740	0.13	-0.1
2,127,910	+		LRK54_RS09740	0.13	+0.1
2,127,910	+		LRK54_RS09740	0.13	-2.0
2,127,910	+		LRK54_RS09740	0.13	+1.0
2,127,910	+		LRK54_RS09740	0.13	+1.6
2,127,910	+		LRK54_RS09740	0.13	-0.7
2,127,910	+		LRK54_RS09740	0.13	+0.8
2,127,910	+		LRK54_RS09740	0.13	-1.3
2,127,910	+		LRK54_RS09740	0.13	-0.1
2,127,911	-		LRK54_RS09740	0.13	-0.7
2,127,911	-		LRK54_RS09740	0.13	+0.5
2,127,911	-		LRK54_RS09740	0.13	-0.5
2,127,911	-		LRK54_RS09740	0.13	+0.9
2,127,911	-		LRK54_RS09740	0.13	+2.1
2,127,911	-		LRK54_RS09740	0.13	+0.4
2,127,911	-		LRK54_RS09740	0.13	+0.9
2,127,911	-		LRK54_RS09740	0.13	+0.2
2,127,911	-		LRK54_RS09740	0.13	-0.9
2,127,911	-		LRK54_RS09740	0.13	-0.8
2,127,911	-		LRK54_RS09740	0.13	+0.0
2,127,911	-		LRK54_RS09740	0.13	-1.1
2,127,911	-		LRK54_RS09740	0.13	+0.6
2,127,911	-		LRK54_RS09740	0.13	+0.9
2,127,911	-		LRK54_RS09740	0.13	-0.1
2,127,955	+		LRK54_RS09740	0.18	-0.7
2,127,955	+		LRK54_RS09740	0.18	-0.3
2,127,956	-		LRK54_RS09740	0.18	+0.3
2,127,956	-		LRK54_RS09740	0.18	+0.6
2,127,956	-		LRK54_RS09740	0.18	+0.3
2,127,956	-		LRK54_RS09740	0.18	-0.0
2,127,956	-		LRK54_RS09740	0.18	-0.0
2,128,407	+		LRK54_RS09740	0.65	-0.6
2,128,408	-		LRK54_RS09740	0.65	-0.7
2,128,455	-		LRK54_RS09740	0.70	-0.0
2,128,464	+		LRK54_RS09740	0.71	-0.3
2,128,464	+		LRK54_RS09740	0.71	-2.2
2,128,464	+		LRK54_RS09740	0.71	-0.7
2,128,464	+		LRK54_RS09740	0.71	+0.2
2,128,464	+		LRK54_RS09740	0.71	+0.7
2,128,464	+		LRK54_RS09740	0.71	+1.5
2,128,464	+		LRK54_RS09740	0.71	+0.4
2,128,464	+		LRK54_RS09740	0.71	-0.3
2,128,465	-		LRK54_RS09740	0.71	-1.9
2,128,465	-		LRK54_RS09740	0.71	-1.6
2,128,465	-		LRK54_RS09740	0.71	+1.5
2,128,465	-		LRK54_RS09740	0.71	+0.3
2,128,465	-		LRK54_RS09740	0.71	+0.2
2,128,465	-		LRK54_RS09740	0.71	-0.7
2,128,465	-		LRK54_RS09740	0.71	-0.3
2,128,465	-		LRK54_RS09740	0.71	+1.0
2,128,465	-		LRK54_RS09740	0.71	+0.1
2,128,465	-		LRK54_RS09740	0.71	-1.0
2,128,465	-		LRK54_RS09740	0.71	-0.4
2,128,501	+		LRK54_RS09740	0.75	-1.6
2,128,501	+		LRK54_RS09740	0.75	+0.2
2,128,501	+		LRK54_RS09740	0.75	-1.6
2,128,501	+		LRK54_RS09740	0.75	-1.0
2,128,501	+		LRK54_RS09740	0.75	-0.5
2,128,501	+		LRK54_RS09740	0.75	+0.2
2,128,501	+		LRK54_RS09740	0.75	-0.7
2,128,501	+		LRK54_RS09740	0.75	-1.7
2,128,501	+		LRK54_RS09740	0.75	+0.3
2,128,501	+		LRK54_RS09740	0.75	-1.0
2,128,501	+		LRK54_RS09740	0.75	-0.3
2,128,501	+		LRK54_RS09740	0.75	+0.3
2,128,501	+		LRK54_RS09740	0.75	+0.2
2,128,502	-		LRK54_RS09740	0.75	+1.2
2,128,502	-		LRK54_RS09740	0.75	-0.6
2,128,502	-		LRK54_RS09740	0.75	+0.2
2,128,502	-		LRK54_RS09740	0.75	-1.2
2,128,502	-		LRK54_RS09740	0.75	-0.7
2,128,502	-		LRK54_RS09740	0.75	-1.7
2,128,502	-		LRK54_RS09740	0.75	+0.8
2,128,502	-		LRK54_RS09740	0.75	-1.1
2,128,606	+		LRK54_RS09740	0.85	+0.8
2,128,626	+		LRK54_RS09740	0.87	-0.8
2,128,627	+		LRK54_RS09740	0.88	-0.2
2,128,627	+		LRK54_RS09740	0.88	-0.7
2,128,627	+		LRK54_RS09740	0.88	-0.2
2,128,627	+		LRK54_RS09740	0.88	-0.1
2,128,627	+		LRK54_RS09740	0.88	+0.8
2,128,627	+		LRK54_RS09740	0.88	-0.2
2,128,627	+		LRK54_RS09740	0.88	-0.0
2,128,627	+		LRK54_RS09740	0.88	+1.2
2,128,627	+		LRK54_RS09740	0.88	-0.9
2,128,627	+		LRK54_RS09740	0.88	-0.1
2,128,627	+		LRK54_RS09740	0.88	-2.2
2,128,627	+		LRK54_RS09740	0.88	+0.4
2,128,627	+		LRK54_RS09740	0.88	-1.4
2,128,627	+		LRK54_RS09740	0.88	-0.1
2,128,627	+		LRK54_RS09740	0.88	-0.8
2,128,627	+		LRK54_RS09740	0.88	+0.1
2,128,627	+		LRK54_RS09740	0.88	+0.2
2,128,627	+		LRK54_RS09740	0.88	-0.6
2,128,627	+		LRK54_RS09740	0.88	+0.2
2,128,627	+		LRK54_RS09740	0.88	+0.5
2,128,627	+		LRK54_RS09740	0.88	+1.5
2,128,627	+		LRK54_RS09740	0.88	+0.9
2,128,627	+		LRK54_RS09740	0.88	+0.5
2,128,627	+		LRK54_RS09740	0.88	-2.2
2,128,627	+		LRK54_RS09740	0.88	+0.3
2,128,627	+		LRK54_RS09740	0.88	-0.5
2,128,627	+		LRK54_RS09740	0.88	-1.1
2,128,627	+		LRK54_RS09740	0.88	+0.2
2,128,627	+		LRK54_RS09740	0.88	-1.6
2,128,627	+		LRK54_RS09740	0.88	-0.3
2,128,627	+		LRK54_RS09740	0.88	+0.2
2,128,627	+		LRK54_RS09740	0.88	-0.3
2,128,627	+		LRK54_RS09740	0.88	-0.3
2,128,627	+		LRK54_RS09740	0.88	-1.2
2,128,627	+		LRK54_RS09740	0.88	-2.8
2,128,627	+		LRK54_RS09740	0.88	-1.3
2,128,627	+		LRK54_RS09740	0.88	+0.4
2,128,627	+		LRK54_RS09740	0.88	-0.8
2,128,627	+		LRK54_RS09740	0.88	+0.8
2,128,628	-		LRK54_RS09740	0.88	-0.9
2,128,628	-		LRK54_RS09740	0.88	-0.3
2,128,628	-		LRK54_RS09740	0.88	-0.2
2,128,628	-		LRK54_RS09740	0.88	-0.2
2,128,628	-		LRK54_RS09740	0.88	-0.0
2,128,628	-		LRK54_RS09740	0.88	-0.3
2,128,628	-		LRK54_RS09740	0.88	-1.0
2,128,628	-		LRK54_RS09740	0.88	-0.3
2,128,628	-		LRK54_RS09740	0.88	+0.4
2,128,628	-		LRK54_RS09740	0.88	+0.5
2,128,628	-		LRK54_RS09740	0.88	+0.9
2,128,628	-		LRK54_RS09740	0.88	-0.4
2,128,628	-		LRK54_RS09740	0.88	-0.5
2,128,628	-		LRK54_RS09740	0.88	-1.3
2,128,628	-		LRK54_RS09740	0.88	+0.5
2,128,628	-		LRK54_RS09740	0.88	+1.0
2,128,628	-		LRK54_RS09740	0.88	-0.8
2,128,628	-		LRK54_RS09740	0.88	-1.9
2,128,628	-		LRK54_RS09740	0.88	-0.7
2,128,628	-		LRK54_RS09740	0.88	+0.7
2,128,628	-		LRK54_RS09740	0.88	+0.2
2,128,628	-		LRK54_RS09740	0.88	+0.9
2,128,628	-		LRK54_RS09740	0.88	-1.1
2,128,628	-		LRK54_RS09740	0.88	+2.5
2,128,628	-		LRK54_RS09740	0.88	-0.7
2,128,628	-		LRK54_RS09740	0.88	+0.7
2,128,628	-		LRK54_RS09740	0.88	+0.7
2,128,628	-		LRK54_RS09740	0.88	-1.2
2,128,628	-		LRK54_RS09740	0.88	+0.1
2,128,628	-		LRK54_RS09740	0.88	-2.5
2,128,628	-		LRK54_RS09740	0.88	+0.4
2,128,628	-		LRK54_RS09740	0.88	-0.8
2,128,628	-		LRK54_RS09740	0.88	+0.0
2,128,628	-		LRK54_RS09740	0.88	-0.1
2,128,628	-		LRK54_RS09740	0.88	-0.2
2,128,628	-		LRK54_RS09740	0.88	-1.2
2,128,628	-		LRK54_RS09740	0.88	-1.7
2,128,628	-		LRK54_RS09740	0.88	-2.3
2,128,628	-		LRK54_RS09740	0.88	-0.1
2,128,628	-		LRK54_RS09740	0.88	+0.5
2,128,628	-		LRK54_RS09740	0.88	-0.0
2,128,628	-		LRK54_RS09740	0.88	-0.2
2,128,628	-		LRK54_RS09740	0.88	-0.4
2,128,645	+		LRK54_RS09740	0.89	-0.6
2,128,645	+		LRK54_RS09740	0.89	-0.7
2,128,646	-		LRK54_RS09740	0.90	-1.7
2,128,646	-		LRK54_RS09740	0.90	+0.2
2,128,646	-		LRK54_RS09740	0.90	+0.4
2,128,646	-		LRK54_RS09740	0.90	-0.6
2,128,646	-		LRK54_RS09740	0.90	+0.5
2,128,646	-		LRK54_RS09740	0.90	-0.7
2,128,663	+				-0.2
2,128,663	+				-0.6
2,128,663	+				-1.4
2,128,663	+				-0.3
2,128,663	+				+0.1
2,128,663	+				-0.5
2,128,664	-				+0.9
2,128,664	-				+0.9
2,128,664	-				+1.2
2,128,664	-				-0.3
2,128,664	-				+1.1
2,128,664	-				+0.6
2,128,664	-				-0.1
2,128,664	-				-1.4
2,128,664	-				+0.9
2,128,810	+		LRK54_RS09745	0.22	-0.3
2,128,810	+		LRK54_RS09745	0.22	+0.3
2,128,810	+		LRK54_RS09745	0.22	-0.0
2,128,810	+		LRK54_RS09745	0.22	-0.5
2,128,810	+		LRK54_RS09745	0.22	-0.1
2,128,810	+		LRK54_RS09745	0.22	+0.6
2,128,810	+		LRK54_RS09745	0.22	+0.3
2,128,810	+		LRK54_RS09745	0.22	-0.8
2,128,810	+		LRK54_RS09745	0.22	+0.4
2,128,810	+		LRK54_RS09745	0.22	+0.2
2,128,811	-		LRK54_RS09745	0.22	+0.4
2,128,811	-		LRK54_RS09745	0.22	+0.3
2,128,811	-		LRK54_RS09745	0.22	+0.9
2,128,811	-		LRK54_RS09745	0.22	+0.2
2,128,811	-		LRK54_RS09745	0.22	-0.7
2,128,811	-		LRK54_RS09745	0.22	+0.7
2,128,811	-		LRK54_RS09745	0.22	+0.6
2,129,186	+		LRK54_RS09745	0.79	-1.6
2,129,593	+		LRK54_RS09750	0.11	+0.0
2,129,593	+		LRK54_RS09750	0.11	-1.2
2,129,593	+		LRK54_RS09750	0.11	-0.9
2,129,593	+		LRK54_RS09750	0.11	-0.2
2,129,593	+		LRK54_RS09750	0.11	-1.7
2,129,594	-		LRK54_RS09750	0.11	-0.2
2,129,594	-		LRK54_RS09750	0.11	-0.3
2,129,594	-		LRK54_RS09750	0.11	-0.2
2,129,594	-		LRK54_RS09750	0.11	+1.9
2,129,659	+		LRK54_RS09750	0.14	-0.2
2,129,659	+		LRK54_RS09750	0.14	-0.4
2,129,659	+		LRK54_RS09750	0.14	-0.2
2,129,659	+		LRK54_RS09750	0.14	-0.5
2,129,659	+		LRK54_RS09750	0.14	-2.0
2,129,659	+		LRK54_RS09750	0.14	-0.5
2,129,660	-		LRK54_RS09750	0.14	+1.9
2,129,704	+		LRK54_RS09750	0.16	+1.6
2,129,704	+		LRK54_RS09750	0.16	+0.2
2,129,704	+		LRK54_RS09750	0.16	+0.0
2,129,704	+		LRK54_RS09750	0.16	-0.4
2,129,704	+		LRK54_RS09750	0.16	-0.4
2,129,704	+		LRK54_RS09750	0.16	+0.6
2,129,704	+				+0.7
2,129,704	+		LRK54_RS09750	0.16	+0.6
2,129,704	+		LRK54_RS09750	0.16	+0.5
2,129,705	-		LRK54_RS09750	0.16	+0.5
2,129,705	-		LRK54_RS09750	0.16	-0.1
2,129,705	-		LRK54_RS09750	0.16	+0.2
2,129,705	-		LRK54_RS09750	0.16	+0.4
2,129,705	-		LRK54_RS09750	0.16	-0.2
2,130,016	+		LRK54_RS09750	0.30	+1.8
2,130,017	-		LRK54_RS09750	0.30	+0.6
2,130,259	+		LRK54_RS09750	0.40	-0.3
2,130,259	+		LRK54_RS09750	0.40	+0.4
2,130,259	+		LRK54_RS09750	0.40	+1.3
2,130,260	-		LRK54_RS09750	0.40	-0.3
2,130,323	+		LRK54_RS09750	0.43	-1.1