Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS05520

Experiment: R2A pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A pH7
1,190,763	+		LRK54_RS05515	0.51	+0.3
1,190,763	+		LRK54_RS05515	0.51	-0.2
1,190,763	+		LRK54_RS05515	0.51	+0.2
1,190,763	+		LRK54_RS05515	0.51	-2.5
1,190,763	+		LRK54_RS05515	0.51	-0.7
1,190,764	-		LRK54_RS05515	0.51	-0.1
1,190,764	-		LRK54_RS05515	0.51	+0.4
1,190,764	-		LRK54_RS05515	0.51	+0.3
1,190,764	-		LRK54_RS05515	0.51	-0.4
1,190,764	-		LRK54_RS05515	0.51	+0.0
1,190,764	-		LRK54_RS05515	0.51	-0.0
1,190,764	-		LRK54_RS05515	0.51	+0.9
1,190,929	+		LRK54_RS05515	0.60	-0.0
1,190,930	-		LRK54_RS05515	0.60	+0.5
1,191,046	+		LRK54_RS05515	0.66	-0.2
1,191,046	+		LRK54_RS05515	0.66	+0.7
1,191,046	+		LRK54_RS05515	0.66	+0.7
1,191,046	+		LRK54_RS05515	0.66	-1.0
1,191,046	+		LRK54_RS05515	0.66	-0.4
1,191,046	+		LRK54_RS05515	0.66	+0.6
1,191,046	+		LRK54_RS05515	0.66	+0.4
1,191,047	-		LRK54_RS05515	0.66	+0.8
1,191,047	-		LRK54_RS05515	0.66	+0.4
1,191,047	-		LRK54_RS05515	0.66	+0.2
1,191,047	-		LRK54_RS05515	0.66	+1.1
1,191,047	-		LRK54_RS05515	0.66	+0.3
1,191,047	-		LRK54_RS05515	0.66	-0.5
1,191,047	-		LRK54_RS05515	0.66	-1.6
1,191,047	-		LRK54_RS05515	0.66	+0.4
1,191,047	-		LRK54_RS05515	0.66	+0.4
1,191,047	-		LRK54_RS05515	0.66	+0.3
1,191,151	+		LRK54_RS05515	0.72	-0.4
1,191,152	-		LRK54_RS05515	0.72	+0.3
1,191,172	+		LRK54_RS05515	0.73	-2.3
1,191,172	+		LRK54_RS05515	0.73	-0.6
1,191,172	+		LRK54_RS05515	0.73	+1.4
1,191,172	+		LRK54_RS05515	0.73	+0.5
1,191,173	-		LRK54_RS05515	0.73	+1.1
1,191,249	+		LRK54_RS05515	0.77	-0.6
1,191,249	+		LRK54_RS05515	0.77	+0.1
1,191,249	+		LRK54_RS05515	0.77	-0.2
1,191,249	+		LRK54_RS05515	0.77	+1.7
1,191,249	+		LRK54_RS05515	0.77	+0.3
1,191,249	+		LRK54_RS05515	0.77	-1.3
1,191,249	+		LRK54_RS05515	0.77	-0.8
1,191,249	+		LRK54_RS05515	0.77	+0.2
1,191,249	+		LRK54_RS05515	0.77	+0.4
1,191,249	+		LRK54_RS05515	0.77	+0.2
1,191,249	+		LRK54_RS05515	0.77	-0.2
1,191,249	+		LRK54_RS05515	0.77	+2.1
1,191,249	+		LRK54_RS05515	0.77	-0.8
1,191,249	+		LRK54_RS05515	0.77	+0.1
1,191,249	+		LRK54_RS05515	0.77	+1.0
1,191,249	+		LRK54_RS05515	0.77	+0.1
1,191,249	+		LRK54_RS05515	0.77	-1.4
1,191,249	+		LRK54_RS05515	0.77	-0.3
1,191,249	+		LRK54_RS05515	0.77	-0.4
1,191,249	+		LRK54_RS05515	0.77	+0.2
1,191,249	+		LRK54_RS05515	0.77	-0.6
1,191,249	+		LRK54_RS05515	0.77	+1.8
1,191,249	+		LRK54_RS05515	0.77	-2.3
1,191,249	+		LRK54_RS05515	0.77	+1.5
1,191,249	+		LRK54_RS05515	0.77	-0.9
1,191,249	+		LRK54_RS05515	0.77	+0.1
1,191,249	+		LRK54_RS05515	0.77	+0.6
1,191,249	+		LRK54_RS05515	0.77	-1.0
1,191,249	+		LRK54_RS05515	0.77	+0.4
1,191,249	+		LRK54_RS05515	0.77	+0.2
1,191,249	+		LRK54_RS05515	0.77	+0.2
1,191,249	+		LRK54_RS05515	0.77	-0.7
1,191,249	+				+1.8
1,191,249	+		LRK54_RS05515	0.77	+0.5
1,191,249	+		LRK54_RS05515	0.77	+1.1
1,191,249	+		LRK54_RS05515	0.77	+1.3
1,191,249	+		LRK54_RS05515	0.77	+1.1
1,191,249	+		LRK54_RS05515	0.77	-0.8
1,191,250	-		LRK54_RS05515	0.77	+0.5
1,191,250	-		LRK54_RS05515	0.77	+1.3
1,191,250	-		LRK54_RS05515	0.77	+0.2
1,191,250	-		LRK54_RS05515	0.77	+1.0
1,191,250	-		LRK54_RS05515	0.77	+0.9
1,191,250	-		LRK54_RS05515	0.77	-1.4
1,191,250	-		LRK54_RS05515	0.77	+0.7
1,191,250	-		LRK54_RS05515	0.77	-0.4
1,191,250	-		LRK54_RS05515	0.77	+0.3
1,191,250	-		LRK54_RS05515	0.77	+0.6
1,191,250	-		LRK54_RS05515	0.77	+0.9
1,191,250	-		LRK54_RS05515	0.77	+1.4
1,191,250	-		LRK54_RS05515	0.77	-1.0
1,191,250	-		LRK54_RS05515	0.77	+1.9
1,191,250	-		LRK54_RS05515	0.77	+1.7
1,191,250	-		LRK54_RS05515	0.77	-0.5
1,191,250	-		LRK54_RS05515	0.77	-0.0
1,191,250	-		LRK54_RS05515	0.77	-0.5
1,191,250	-		LRK54_RS05515	0.77	-0.4
1,191,250	-		LRK54_RS05515	0.77	+1.4
1,191,250	-		LRK54_RS05515	0.77	+0.3
1,191,250	-		LRK54_RS05515	0.77	-1.1
1,191,250	-		LRK54_RS05515	0.77	+1.7
1,191,250	-		LRK54_RS05515	0.77	-1.0
1,191,250	-		LRK54_RS05515	0.77	-0.7
1,191,250	-		LRK54_RS05515	0.77	+1.4
1,191,250	-		LRK54_RS05515	0.77	+0.2
1,191,250	-		LRK54_RS05515	0.77	+1.0
1,191,250	-		LRK54_RS05515	0.77	-0.4
1,191,251	+		LRK54_RS05515	0.77	+0.6
1,191,251	+		LRK54_RS05515	0.77	+1.5
1,191,251	+		LRK54_RS05515	0.77	+0.6
1,191,251	+		LRK54_RS05515	0.77	+0.3
1,191,251	+		LRK54_RS05515	0.77	+0.1
1,191,251	+		LRK54_RS05515	0.77	-0.9
1,191,251	+		LRK54_RS05515	0.77	-0.6
1,191,251	+		LRK54_RS05515	0.77	-1.7
1,191,251	+		LRK54_RS05515	0.77	+0.4
1,191,251	+		LRK54_RS05515	0.77	+0.3
1,191,251	+		LRK54_RS05515	0.77	+1.8
1,191,251	+		LRK54_RS05515	0.77	+1.8
1,191,251	+		LRK54_RS05515	0.77	-0.2
1,191,251	+		LRK54_RS05515	0.77	+2.0
1,191,251	+		LRK54_RS05515	0.77	+0.8
1,191,251	+		LRK54_RS05515	0.77	+0.1
1,191,251	+		LRK54_RS05515	0.77	+0.8
1,191,251	+		LRK54_RS05515	0.77	+0.1
1,191,251	+		LRK54_RS05515	0.77	+0.2
1,191,251	+		LRK54_RS05515	0.77	+0.1
1,191,251	+		LRK54_RS05515	0.77	-0.7
1,191,251	+		LRK54_RS05515	0.77	+0.8
1,191,251	+		LRK54_RS05515	0.77	+1.1
1,191,251	+		LRK54_RS05515	0.77	-0.7
1,191,251	+		LRK54_RS05515	0.77	+0.0
1,191,251	+		LRK54_RS05515	0.77	+2.4
1,191,251	+		LRK54_RS05515	0.77	+0.2
1,191,251	+		LRK54_RS05515	0.77	-1.0
1,191,251	+		LRK54_RS05515	0.77	+0.2
1,191,251	+		LRK54_RS05515	0.77	+0.1
1,191,251	+		LRK54_RS05515	0.77	+0.1
1,191,251	+		LRK54_RS05515	0.77	+0.4
1,191,251	+		LRK54_RS05515	0.77	+0.1
1,191,251	+		LRK54_RS05515	0.77	+0.6
1,191,251	+		LRK54_RS05515	0.77	+0.4
1,191,251	+		LRK54_RS05515	0.77	+0.3
1,191,251	+		LRK54_RS05515	0.77	+0.6
1,191,251	+		LRK54_RS05515	0.77	+0.8
1,191,251	+		LRK54_RS05515	0.77	-0.2
1,191,251	+		LRK54_RS05515	0.77	-0.2
1,191,251	+		LRK54_RS05515	0.77	+2.2
1,191,251	+		LRK54_RS05515	0.77	+0.3
1,191,251	+		LRK54_RS05515	0.77	+0.3
1,191,251	+		LRK54_RS05515	0.77	+0.4
1,191,251	+		LRK54_RS05515	0.77	-0.1
1,191,251	+		LRK54_RS05515	0.77	+0.1
1,191,251	+		LRK54_RS05515	0.77	-0.2
1,191,251	+		LRK54_RS05515	0.77	-0.5
1,191,251	+		LRK54_RS05515	0.77	-0.8
1,191,251	+		LRK54_RS05515	0.77	+0.2
1,191,251	+		LRK54_RS05515	0.77	-1.2
1,191,251	+		LRK54_RS05515	0.77	-1.0
1,191,251	+		LRK54_RS05515	0.77	-0.2
1,191,251	+		LRK54_RS05515	0.77	+1.7
1,191,251	+		LRK54_RS05515	0.77	+0.0
1,191,251	+		LRK54_RS05515	0.77	+0.3
1,191,251	+		LRK54_RS05515	0.77	-0.5
1,191,251	+		LRK54_RS05515	0.77	-1.5
1,191,251	+		LRK54_RS05515	0.77	-0.7
1,191,251	+		LRK54_RS05515	0.77	+0.1
1,191,251	+		LRK54_RS05515	0.77	-1.2
1,191,251	+		LRK54_RS05515	0.77	+1.4
1,191,252	-		LRK54_RS05515	0.77	+0.0
1,191,252	-		LRK54_RS05515	0.77	-0.7
1,191,252	-		LRK54_RS05515	0.77	-0.7
1,191,252	-		LRK54_RS05515	0.77	+0.5
1,191,252	-		LRK54_RS05515	0.77	-1.0
1,191,252	-		LRK54_RS05515	0.77	-0.2
1,191,252	-		LRK54_RS05515	0.77	-0.2
1,191,252	-		LRK54_RS05515	0.77	+0.4
1,191,252	-		LRK54_RS05515	0.77	-0.4
1,191,252	-		LRK54_RS05515	0.77	+0.6
1,191,252	-		LRK54_RS05515	0.77	+0.5
1,191,252	-		LRK54_RS05515	0.77	-1.2
1,191,252	-		LRK54_RS05515	0.77	+0.8
1,191,252	-		LRK54_RS05515	0.77	+1.7
1,191,252	-		LRK54_RS05515	0.77	-0.7
1,191,252	-		LRK54_RS05515	0.77	-0.2
1,191,252	-		LRK54_RS05515	0.77	+0.6
1,191,252	-		LRK54_RS05515	0.77	-0.6
1,191,252	-		LRK54_RS05515	0.77	+0.9
1,191,252	-		LRK54_RS05515	0.77	-0.5
1,191,252	-		LRK54_RS05515	0.77	+0.5
1,191,252	-		LRK54_RS05515	0.77	+0.1
1,191,252	-		LRK54_RS05515	0.77	+1.3
1,191,252	-		LRK54_RS05515	0.77	+0.6
1,191,252	-		LRK54_RS05515	0.77	-0.1
1,191,252	-		LRK54_RS05515	0.77	-0.3
1,191,252	-		LRK54_RS05515	0.77	+1.1
1,191,252	-		LRK54_RS05515	0.77	+1.6
1,191,252	-		LRK54_RS05515	0.77	+0.8
1,191,252	-		LRK54_RS05515	0.77	+0.7
1,191,252	-		LRK54_RS05515	0.77	+0.7
1,191,252	-		LRK54_RS05515	0.77	+0.6
1,191,252	-		LRK54_RS05515	0.77	-0.4
1,191,252	-		LRK54_RS05515	0.77	+1.0
1,191,252	-		LRK54_RS05515	0.77	+0.8
1,191,252	-		LRK54_RS05515	0.77	+1.1
1,191,252	-		LRK54_RS05515	0.77	-0.1
1,191,252	-		LRK54_RS05515	0.77	-0.4
1,191,252	-		LRK54_RS05515	0.77	-0.3
1,191,252	-		LRK54_RS05515	0.77	-1.4
1,191,252	-		LRK54_RS05515	0.77	+0.6
1,191,252	-		LRK54_RS05515	0.77	+0.1
1,191,252	-		LRK54_RS05515	0.77	-1.1
1,191,252	-		LRK54_RS05515	0.77	+0.5
1,191,252	-		LRK54_RS05515	0.77	+1.6
1,191,252	-		LRK54_RS05515	0.77	+0.5
1,191,252	-		LRK54_RS05515	0.77	-1.3
1,191,252	-		LRK54_RS05515	0.77	+1.3
1,191,252	-		LRK54_RS05515	0.77	-1.5
1,191,253	+		LRK54_RS05515	0.77	-0.0
1,191,253	+		LRK54_RS05515	0.77	+0.9
1,191,253	+		LRK54_RS05515	0.77	-0.2
1,191,253	+		LRK54_RS05515	0.77	+0.3
1,191,253	+		LRK54_RS05515	0.77	+0.5
1,191,253	+		LRK54_RS05515	0.77	-1.6
1,191,253	+		LRK54_RS05515	0.77	-0.1
1,191,253	+		LRK54_RS05515	0.77	+0.0
1,191,253	+		LRK54_RS05515	0.77	+0.8
1,191,253	+		LRK54_RS05515	0.77	-0.4
1,191,253	+		LRK54_RS05515	0.77	+0.4
1,191,253	+		LRK54_RS05515	0.77	-0.6
1,191,253	+		LRK54_RS05515	0.77	-0.2
1,191,253	+		LRK54_RS05515	0.77	+0.8
1,191,253	+		LRK54_RS05515	0.77	+0.3
1,191,253	+		LRK54_RS05515	0.77	-1.3
1,191,253	+		LRK54_RS05515	0.77	+0.6
1,191,253	+		LRK54_RS05515	0.77	+1.4
1,191,253	+		LRK54_RS05515	0.77	+0.4
1,191,253	+		LRK54_RS05515	0.77	+0.1
1,191,253	+		LRK54_RS05515	0.77	-0.3
1,191,253	+		LRK54_RS05515	0.77	-1.3
1,191,253	+		LRK54_RS05515	0.77	-2.0
1,191,253	+		LRK54_RS05515	0.77	-0.3
1,191,253	+		LRK54_RS05515	0.77	+1.8
1,191,253	+		LRK54_RS05515	0.77	+0.6
1,191,253	+		LRK54_RS05515	0.77	-1.4
1,191,253	+		LRK54_RS05515	0.77	+0.3
1,191,253	+		LRK54_RS05515	0.77	-0.3
1,191,253	+		LRK54_RS05515	0.77	-0.9
1,191,253	+		LRK54_RS05515	0.77	+0.6
1,191,253	+		LRK54_RS05515	0.77	+0.2
1,191,253	+		LRK54_RS05515	0.77	+0.2
1,191,253	+		LRK54_RS05515	0.77	-0.7
1,191,253	+		LRK54_RS05515	0.77	+1.4
1,191,253	+		LRK54_RS05515	0.77	+0.6
1,191,253	+		LRK54_RS05515	0.77	-0.3
1,191,253	+		LRK54_RS05515	0.77	-1.3
1,191,253	+		LRK54_RS05515	0.77	+1.0
1,191,253	+		LRK54_RS05515	0.77	-0.1
1,191,253	+		LRK54_RS05515	0.77	+0.1
1,191,253	+		LRK54_RS05515	0.77	-0.9
1,191,253	+		LRK54_RS05515	0.77	-0.2
1,191,253	+		LRK54_RS05515	0.77	+0.4
1,191,253	+		LRK54_RS05515	0.77	-0.3
1,191,253	+		LRK54_RS05515	0.77	+0.2
1,191,253	+		LRK54_RS05515	0.77	+1.0
1,191,253	+		LRK54_RS05515	0.77	-2.2
1,191,253	+		LRK54_RS05515	0.77	-0.0
1,191,253	+		LRK54_RS05515	0.77	+1.1
1,191,253	+		LRK54_RS05515	0.77	-1.0
1,191,253	+		LRK54_RS05515	0.77	+0.3
1,191,253	+		LRK54_RS05515	0.77	-0.5
1,191,253	+		LRK54_RS05515	0.77	-1.2
1,191,253	+		LRK54_RS05515	0.77	-1.5
1,191,253	+		LRK54_RS05515	0.77	+0.2
1,191,253	+		LRK54_RS05515	0.77	+0.2
1,191,253	+		LRK54_RS05515	0.77	+1.3
1,191,253	+		LRK54_RS05515	0.77	+1.1
1,191,253	+		LRK54_RS05515	0.77	+0.2
1,191,253	+		LRK54_RS05515	0.77	+0.6
1,191,253	+		LRK54_RS05515	0.77	+0.4
1,191,253	+		LRK54_RS05515	0.77	-0.3
1,191,253	+		LRK54_RS05515	0.77	-1.2
1,191,253	+		LRK54_RS05515	0.77	-1.2
1,191,253	+		LRK54_RS05515	0.77	+2.0
1,191,253	+		LRK54_RS05515	0.77	+0.6
1,191,254	-		LRK54_RS05515	0.77	+1.1
1,191,254	-		LRK54_RS05515	0.77	-2.0
1,191,254	-		LRK54_RS05515	0.77	+0.4
1,191,254	-		LRK54_RS05515	0.77	+0.4
1,191,254	-		LRK54_RS05515	0.77	+0.8
1,191,254	-		LRK54_RS05515	0.77	+0.5
1,191,254	-		LRK54_RS05515	0.77	+1.4
1,191,254	-		LRK54_RS05515	0.77	-0.3
1,191,254	-		LRK54_RS05515	0.77	-0.1
1,191,254	-		LRK54_RS05515	0.77	+0.1
1,191,254	-		LRK54_RS05515	0.77	+1.4
1,191,254	-		LRK54_RS05515	0.77	+1.0
1,191,254	-		LRK54_RS05515	0.77	-0.1
1,191,254	-		LRK54_RS05515	0.77	-1.1
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