Experiment: L-Lysine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25440 and AO356_25445 are separated by 152 nucleotides AO356_25445 and AO356_25450 are separated by 36 nucleotides AO356_25450 and AO356_25455 are separated by 26 nucleotides
AO356_25440: AO356_25440 - histidine kinase, at 5,752,231 to 5,753,682
_25440
AO356_25445: AO356_25445 - hypothetical protein, at 5,753,835 to 5,754,116
_25445
AO356_25450: AO356_25450 - LysR family transcriptional regulator, at 5,754,153 to 5,755,094
_25450
AO356_25455: AO356_25455 - transcriptional regulator, at 5,755,121 to 5,756,140
_25455
Position (kb) 5754
5755
5756 Strain fitness (log2 ratio) -1
0
1 at 5753.462 kb on + strand, within AO356_25440 at 5753.462 kb on + strand, within AO356_25440 at 5753.462 kb on + strand, within AO356_25440 at 5753.463 kb on - strand, within AO356_25440 at 5753.561 kb on + strand at 5753.561 kb on + strand at 5753.561 kb on + strand at 5753.562 kb on - strand at 5753.562 kb on - strand at 5753.562 kb on - strand at 5753.831 kb on + strand at 5753.831 kb on + strand at 5753.832 kb on - strand at 5753.836 kb on + strand at 5753.836 kb on + strand at 5753.836 kb on + strand at 5753.837 kb on - strand at 5753.859 kb on + strand at 5753.859 kb on + strand at 5753.866 kb on + strand, within AO356_25445 at 5753.867 kb on - strand, within AO356_25445 at 5753.972 kb on + strand, within AO356_25445 at 5753.972 kb on + strand, within AO356_25445 at 5753.974 kb on + strand, within AO356_25445 at 5753.974 kb on + strand, within AO356_25445 at 5753.975 kb on - strand, within AO356_25445 at 5753.975 kb on - strand, within AO356_25445 at 5753.975 kb on - strand, within AO356_25445 at 5753.975 kb on - strand, within AO356_25445 at 5753.976 kb on + strand, within AO356_25445 at 5754.054 kb on + strand, within AO356_25445 at 5754.152 kb on + strand at 5754.152 kb on + strand at 5754.152 kb on + strand at 5754.153 kb on - strand at 5754.489 kb on + strand, within AO356_25450 at 5754.751 kb on + strand, within AO356_25450 at 5754.897 kb on + strand, within AO356_25450 at 5754.897 kb on + strand, within AO356_25450 at 5755.326 kb on + strand, within AO356_25455 at 5755.327 kb on - strand, within AO356_25455 at 5756.075 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (C) remove 5,753,462 + AO356_25440 0.85 +1.1 5,753,462 + AO356_25440 0.85 +0.5 5,753,462 + AO356_25440 0.85 +0.4 5,753,463 - AO356_25440 0.85 +0.0 5,753,561 + +0.1 5,753,561 + -1.6 5,753,561 + -0.0 5,753,562 - +0.9 5,753,562 - +0.8 5,753,562 - -0.2 5,753,831 + -0.3 5,753,831 + +0.5 5,753,832 - -0.1 5,753,836 + +0.6 5,753,836 + -0.6 5,753,836 + -1.7 5,753,837 - -0.9 5,753,859 + -1.0 5,753,859 + +1.0 5,753,866 + AO356_25445 0.11 +0.3 5,753,867 - AO356_25445 0.11 -1.4 5,753,972 + AO356_25445 0.49 -1.3 5,753,972 + AO356_25445 0.49 -0.5 5,753,974 + AO356_25445 0.49 -0.1 5,753,974 + AO356_25445 0.49 -0.1 5,753,975 - AO356_25445 0.50 -1.3 5,753,975 - AO356_25445 0.50 +1.1 5,753,975 - AO356_25445 0.50 +0.5 5,753,975 - AO356_25445 0.50 +0.2 5,753,976 + AO356_25445 0.50 +0.2 5,754,054 + AO356_25445 0.78 -1.0 5,754,152 + +0.4 5,754,152 + +0.4 5,754,152 + -1.4 5,754,153 - +0.7 5,754,489 + AO356_25450 0.36 +0.1 5,754,751 + AO356_25450 0.63 -0.7 5,754,897 + AO356_25450 0.79 -0.7 5,754,897 + AO356_25450 0.79 -0.6 5,755,326 + AO356_25455 0.20 +0.0 5,755,327 - AO356_25455 0.20 -0.0 5,756,075 + +0.6
Or see this region's nucleotide sequence