Experiment: L-Lysine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22770 and AO356_22775 are separated by 202 nucleotides AO356_22775 and AO356_22780 are separated by 109 nucleotides AO356_22780 and AO356_22785 are separated by 30 nucleotides AO356_22785 and AO356_22790 are separated by 115 nucleotides AO356_22790 and AO356_22795 are separated by 234 nucleotides
AO356_22770: AO356_22770 - hypothetical protein, at 5,084,590 to 5,084,892
_22770
AO356_22775: AO356_22775 - hypothetical protein, at 5,085,095 to 5,085,445
_22775
AO356_22780: AO356_22780 - hypothetical protein, at 5,085,555 to 5,085,785
_22780
AO356_22785: AO356_22785 - hypothetical protein, at 5,085,816 to 5,086,097
_22785
AO356_22790: AO356_22790 - hypothetical protein, at 5,086,213 to 5,086,425
_22790
AO356_22795: AO356_22795 - UTP--glucose-1-phosphate uridylyltransferase, at 5,086,660 to 5,087,499
_22795
Position (kb) 5085
5086 Strain fitness (log2 ratio) -2
-1
0
1 at 5084.759 kb on + strand, within AO356_22770 at 5084.759 kb on + strand, within AO356_22770 at 5084.760 kb on - strand, within AO356_22770 at 5084.760 kb on - strand, within AO356_22770 at 5084.760 kb on - strand, within AO356_22770 at 5084.840 kb on - strand, within AO356_22770 at 5084.974 kb on + strand at 5084.974 kb on + strand at 5084.974 kb on + strand at 5084.974 kb on + strand at 5084.975 kb on - strand at 5084.975 kb on - strand at 5084.975 kb on - strand at 5084.978 kb on - strand at 5085.008 kb on + strand at 5085.080 kb on + strand at 5085.080 kb on + strand at 5085.081 kb on - strand at 5085.094 kb on + strand at 5085.094 kb on + strand at 5085.094 kb on + strand at 5085.094 kb on + strand at 5085.094 kb on + strand at 5085.094 kb on + strand at 5085.094 kb on + strand at 5085.094 kb on + strand at 5085.094 kb on + strand at 5085.094 kb on + strand at 5085.095 kb on - strand at 5085.095 kb on - strand at 5085.095 kb on - strand at 5085.209 kb on + strand, within AO356_22775 at 5085.209 kb on + strand, within AO356_22775 at 5085.210 kb on - strand, within AO356_22775 at 5085.210 kb on - strand, within AO356_22775 at 5085.210 kb on - strand, within AO356_22775 at 5085.433 kb on + strand at 5085.433 kb on + strand at 5085.484 kb on - strand at 5085.484 kb on - strand at 5085.596 kb on + strand, within AO356_22780 at 5085.596 kb on + strand, within AO356_22780 at 5085.596 kb on + strand, within AO356_22780 at 5085.596 kb on + strand, within AO356_22780 at 5085.597 kb on - strand, within AO356_22780 at 5085.597 kb on - strand, within AO356_22780 at 5085.597 kb on - strand, within AO356_22780 at 5085.597 kb on - strand, within AO356_22780 at 5085.597 kb on - strand, within AO356_22780 at 5085.597 kb on - strand, within AO356_22780 at 5085.597 kb on - strand, within AO356_22780 at 5085.597 kb on - strand, within AO356_22780 at 5085.600 kb on + strand, within AO356_22780 at 5085.600 kb on + strand, within AO356_22780 at 5085.600 kb on + strand, within AO356_22780 at 5085.600 kb on + strand, within AO356_22780 at 5085.601 kb on - strand, within AO356_22780 at 5085.601 kb on - strand, within AO356_22780 at 5085.745 kb on + strand, within AO356_22780 at 5085.793 kb on + strand at 5085.802 kb on + strand at 5085.803 kb on - strand at 5085.817 kb on + strand at 5085.817 kb on + strand at 5085.817 kb on + strand at 5085.817 kb on + strand at 5085.818 kb on - strand at 5085.818 kb on - strand at 5085.821 kb on + strand at 5085.821 kb on + strand at 5085.822 kb on - strand at 5085.822 kb on - strand at 5085.961 kb on + strand, within AO356_22785 at 5085.961 kb on + strand, within AO356_22785 at 5085.961 kb on + strand, within AO356_22785 at 5085.961 kb on + strand, within AO356_22785 at 5085.961 kb on + strand, within AO356_22785 at 5086.030 kb on + strand, within AO356_22785 at 5086.030 kb on + strand, within AO356_22785 at 5086.138 kb on - strand at 5086.138 kb on - strand at 5086.162 kb on + strand at 5086.162 kb on + strand at 5086.163 kb on - strand at 5086.163 kb on - strand at 5086.163 kb on - strand at 5086.163 kb on - strand at 5086.195 kb on + strand at 5086.195 kb on + strand at 5086.195 kb on + strand at 5086.195 kb on + strand at 5086.195 kb on + strand at 5086.195 kb on + strand at 5086.196 kb on - strand at 5086.196 kb on - strand at 5086.196 kb on - strand at 5086.323 kb on + strand, within AO356_22790 at 5086.323 kb on + strand, within AO356_22790 at 5086.355 kb on + strand, within AO356_22790 at 5086.356 kb on - strand, within AO356_22790 at 5086.356 kb on - strand, within AO356_22790 at 5086.362 kb on + strand, within AO356_22790 at 5086.363 kb on - strand, within AO356_22790 at 5086.363 kb on - strand, within AO356_22790 at 5086.401 kb on - strand, within AO356_22790 at 5086.427 kb on + strand at 5086.428 kb on - strand at 5086.428 kb on - strand at 5086.428 kb on - strand at 5086.428 kb on - strand at 5086.428 kb on - strand at 5086.428 kb on - strand at 5086.428 kb on - strand at 5086.428 kb on - strand at 5086.464 kb on - strand at 5086.464 kb on - strand at 5086.497 kb on + strand at 5086.498 kb on - strand at 5086.541 kb on - strand at 5086.541 kb on - strand at 5086.541 kb on - strand at 5086.562 kb on + strand at 5086.562 kb on + strand at 5086.562 kb on + strand at 5086.595 kb on + strand at 5086.595 kb on + strand at 5086.595 kb on + strand at 5086.595 kb on + strand at 5086.595 kb on + strand at 5086.595 kb on + strand at 5086.595 kb on + strand at 5086.596 kb on - strand at 5086.596 kb on - strand at 5086.616 kb on - strand at 5086.634 kb on + strand at 5086.635 kb on - strand at 5086.657 kb on + strand at 5086.657 kb on + strand at 5086.659 kb on + strand at 5086.659 kb on + strand at 5086.659 kb on + strand at 5086.659 kb on + strand at 5086.659 kb on + strand at 5086.771 kb on + strand, within AO356_22795
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine (C) remove 5,084,759 + AO356_22770 0.56 -1.3 5,084,759 + AO356_22770 0.56 -0.9 5,084,760 - AO356_22770 0.56 -0.9 5,084,760 - AO356_22770 0.56 -0.4 5,084,760 - AO356_22770 0.56 -0.4 5,084,840 - AO356_22770 0.83 +0.8 5,084,974 + +0.9 5,084,974 + -0.2 5,084,974 + +0.1 5,084,974 + -0.7 5,084,975 - +0.1 5,084,975 - +0.9 5,084,975 - -0.9 5,084,978 - +0.9 5,085,008 + -1.4 5,085,080 + +1.0 5,085,080 + +0.1 5,085,081 - -0.1 5,085,094 + +0.1 5,085,094 + +0.2 5,085,094 + +0.0 5,085,094 + -1.4 5,085,094 + +1.2 5,085,094 + -0.1 5,085,094 + +0.7 5,085,094 + +1.2 5,085,094 + +0.3 5,085,094 + -0.6 5,085,095 - +0.5 5,085,095 - +0.4 5,085,095 - -0.4 5,085,209 + AO356_22775 0.32 -0.1 5,085,209 + AO356_22775 0.32 -1.0 5,085,210 - AO356_22775 0.33 -0.8 5,085,210 - AO356_22775 0.33 -2.5 5,085,210 - AO356_22775 0.33 -0.9 5,085,433 + +1.6 5,085,433 + +0.6 5,085,484 - -0.2 5,085,484 - -1.0 5,085,596 + AO356_22780 0.18 +0.1 5,085,596 + AO356_22780 0.18 -1.4 5,085,596 + AO356_22780 0.18 +1.0 5,085,596 + AO356_22780 0.18 -0.1 5,085,597 - AO356_22780 0.18 -0.6 5,085,597 - AO356_22780 0.18 -1.6 5,085,597 - AO356_22780 0.18 -0.6 5,085,597 - AO356_22780 0.18 +0.1 5,085,597 - AO356_22780 0.18 -0.6 5,085,597 - AO356_22780 0.18 +0.7 5,085,597 - AO356_22780 0.18 +0.6 5,085,597 - AO356_22780 0.18 +1.2 5,085,600 + AO356_22780 0.19 -0.5 5,085,600 + AO356_22780 0.19 +1.0 5,085,600 + AO356_22780 0.19 +0.7 5,085,600 + AO356_22780 0.19 -0.1 5,085,601 - AO356_22780 0.20 +0.9 5,085,601 - AO356_22780 0.20 +0.8 5,085,745 + AO356_22780 0.82 -0.5 5,085,793 + +1.0 5,085,802 + -0.1 5,085,803 - +0.1 5,085,817 + +0.2 5,085,817 + +1.1 5,085,817 + -0.2 5,085,817 + -1.0 5,085,818 - -1.2 5,085,818 - -0.1 5,085,821 + -1.5 5,085,821 + -0.8 5,085,822 - +0.2 5,085,822 - -1.3 5,085,961 + AO356_22785 0.51 +0.0 5,085,961 + AO356_22785 0.51 +0.8 5,085,961 + AO356_22785 0.51 +0.5 5,085,961 + AO356_22785 0.51 +0.3 5,085,961 + AO356_22785 0.51 +0.5 5,086,030 + AO356_22785 0.76 +0.4 5,086,030 + AO356_22785 0.76 +0.7 5,086,138 - -0.6 5,086,138 - -0.1 5,086,162 + +0.3 5,086,162 + -1.3 5,086,163 - -0.7 5,086,163 - -0.6 5,086,163 - +0.1 5,086,163 - +1.0 5,086,195 + -0.1 5,086,195 + +1.3 5,086,195 + +0.5 5,086,195 + -0.3 5,086,195 + +0.5 5,086,195 + +0.8 5,086,196 - +0.4 5,086,196 - +1.3 5,086,196 - -0.0 5,086,323 + AO356_22790 0.52 +1.7 5,086,323 + AO356_22790 0.52 +0.1 5,086,355 + AO356_22790 0.67 +0.5 5,086,356 - AO356_22790 0.67 -0.1 5,086,356 - AO356_22790 0.67 -0.3 5,086,362 + AO356_22790 0.70 -0.3 5,086,363 - AO356_22790 0.70 +1.2 5,086,363 - AO356_22790 0.70 +1.7 5,086,401 - AO356_22790 0.88 -0.6 5,086,427 + -0.4 5,086,428 - +0.8 5,086,428 - +0.3 5,086,428 - -0.3 5,086,428 - -0.4 5,086,428 - +0.2 5,086,428 - -0.9 5,086,428 - -0.1 5,086,428 - -0.5 5,086,464 - +1.1 5,086,464 - +0.0 5,086,497 + -0.3 5,086,498 - -0.2 5,086,541 - +0.7 5,086,541 - +0.8 5,086,541 - -0.9 5,086,562 + +0.7 5,086,562 + +0.2 5,086,562 + -0.1 5,086,595 + +0.4 5,086,595 + -0.1 5,086,595 + +0.2 5,086,595 + +0.4 5,086,595 + +0.9 5,086,595 + +0.5 5,086,595 + -1.2 5,086,596 - -2.6 5,086,596 - -2.1 5,086,616 - -2.7 5,086,634 + +0.2 5,086,635 - -0.2 5,086,657 + -2.0 5,086,657 + -1.9 5,086,659 + -2.7 5,086,659 + -1.3 5,086,659 + -1.5 5,086,659 + -1.9 5,086,659 + -1.6 5,086,771 + AO356_22795 0.13 -1.3
Or see this region's nucleotide sequence