Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_03720 and IAI47_03725 are separated by 279 nucleotides IAI47_03725 and IAI47_03730 are separated by 256 nucleotides
IAI47_03720: IAI47_03720 - ribose-5-phosphate isomerase RpiA, at 776,444 to 777,103
_03720
IAI47_03725: IAI47_03725 - phosphoglycerate dehydrogenase, at 777,383 to 778,621
_03725
IAI47_03730: IAI47_03730 - 5-formyltetrahydrofolate cyclo-ligase, at 778,878 to 779,471
_03730
Position (kb) 777
778
779 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 776.401 kb on + strand at 776.401 kb on + strand at 776.402 kb on - strand at 776.402 kb on - strand at 776.402 kb on - strand at 776.403 kb on + strand at 776.403 kb on + strand at 776.406 kb on + strand at 776.406 kb on + strand at 776.406 kb on + strand at 776.406 kb on + strand at 776.434 kb on + strand at 776.434 kb on + strand at 776.440 kb on + strand at 776.440 kb on + strand at 776.440 kb on + strand at 776.440 kb on + strand at 776.440 kb on + strand at 777.091 kb on + strand at 777.092 kb on - strand at 777.132 kb on - strand at 777.132 kb on - strand at 777.181 kb on + strand at 777.181 kb on + strand at 777.182 kb on - strand at 777.182 kb on - strand at 777.182 kb on - strand at 777.182 kb on - strand at 777.182 kb on - strand at 777.182 kb on - strand at 777.182 kb on - strand at 777.182 kb on - strand at 777.190 kb on + strand at 777.190 kb on + strand at 777.190 kb on + strand at 777.190 kb on + strand at 777.191 kb on - strand at 777.191 kb on - strand at 777.191 kb on - strand at 777.255 kb on + strand at 777.255 kb on + strand at 777.255 kb on + strand at 777.256 kb on - strand at 777.256 kb on - strand at 777.256 kb on - strand at 777.256 kb on - strand at 777.256 kb on - strand at 777.256 kb on - strand at 777.256 kb on - strand at 777.256 kb on - strand at 777.256 kb on - strand at 777.300 kb on + strand at 777.345 kb on + strand at 777.346 kb on - strand at 777.346 kb on - strand at 777.346 kb on - strand at 777.346 kb on - strand at 777.346 kb on - strand at 777.346 kb on - strand at 777.346 kb on - strand at 777.346 kb on - strand at 777.350 kb on + strand at 777.350 kb on + strand at 777.350 kb on + strand at 777.350 kb on + strand at 777.351 kb on - strand at 777.351 kb on - strand at 777.351 kb on - strand at 777.351 kb on - strand at 777.351 kb on - strand at 777.372 kb on - strand at 777.372 kb on - strand at 777.393 kb on + strand at 777.393 kb on + strand at 777.394 kb on - strand at 777.394 kb on - strand at 777.394 kb on - strand at 777.394 kb on - strand at 777.394 kb on - strand at 777.394 kb on - strand at 777.394 kb on - strand at 777.410 kb on - strand at 777.410 kb on - strand at 777.410 kb on - strand at 777.415 kb on + strand at 777.415 kb on + strand at 777.415 kb on + strand at 777.415 kb on + strand at 777.415 kb on + strand at 777.415 kb on + strand at 777.416 kb on - strand at 777.416 kb on - strand at 777.416 kb on - strand at 777.416 kb on - strand at 777.476 kb on + strand at 777.476 kb on + strand at 777.476 kb on + strand at 777.476 kb on + strand at 777.476 kb on + strand at 777.477 kb on - strand at 777.477 kb on - strand at 777.477 kb on - strand at 777.479 kb on - strand at 777.479 kb on - strand at 777.523 kb on - strand, within IAI47_03725 at 777.555 kb on + strand, within IAI47_03725 at 777.808 kb on - strand, within IAI47_03725 at 777.847 kb on + strand, within IAI47_03725 at 777.857 kb on + strand, within IAI47_03725 at 777.908 kb on + strand, within IAI47_03725 at 777.920 kb on + strand, within IAI47_03725 at 777.920 kb on + strand, within IAI47_03725 at 777.921 kb on - strand, within IAI47_03725 at 777.921 kb on - strand, within IAI47_03725 at 777.921 kb on - strand, within IAI47_03725 at 777.964 kb on - strand, within IAI47_03725 at 777.964 kb on - strand, within IAI47_03725 at 778.039 kb on + strand, within IAI47_03725 at 778.039 kb on + strand, within IAI47_03725 at 778.040 kb on - strand, within IAI47_03725 at 778.040 kb on - strand, within IAI47_03725 at 778.110 kb on + strand, within IAI47_03725 at 778.111 kb on - strand, within IAI47_03725 at 778.147 kb on + strand, within IAI47_03725 at 778.148 kb on - strand, within IAI47_03725 at 778.148 kb on - strand, within IAI47_03725 at 778.148 kb on - strand, within IAI47_03725 at 778.148 kb on - strand, within IAI47_03725 at 778.213 kb on + strand, within IAI47_03725 at 778.213 kb on + strand, within IAI47_03725 at 778.213 kb on + strand, within IAI47_03725 at 778.214 kb on - strand, within IAI47_03725 at 778.214 kb on - strand, within IAI47_03725 at 778.230 kb on - strand, within IAI47_03725 at 778.325 kb on + strand, within IAI47_03725 at 778.325 kb on + strand, within IAI47_03725 at 778.326 kb on - strand, within IAI47_03725 at 778.399 kb on + strand, within IAI47_03725 at 778.400 kb on - strand, within IAI47_03725 at 778.400 kb on - strand, within IAI47_03725 at 778.493 kb on + strand, within IAI47_03725 at 778.494 kb on - strand, within IAI47_03725 at 778.494 kb on - strand, within IAI47_03725 at 778.520 kb on + strand at 778.520 kb on + strand at 778.520 kb on + strand at 778.520 kb on + strand at 778.520 kb on + strand at 778.520 kb on + strand at 778.521 kb on - strand at 778.521 kb on - strand at 778.521 kb on - strand at 778.594 kb on + strand at 778.594 kb on + strand at 778.595 kb on - strand at 778.597 kb on + strand at 778.597 kb on + strand at 778.598 kb on - strand at 778.598 kb on - strand at 778.598 kb on - strand at 778.598 kb on - strand at 778.616 kb on + strand at 778.616 kb on + strand at 778.616 kb on + strand at 778.616 kb on + strand at 778.617 kb on - strand at 778.617 kb on - strand at 778.619 kb on + strand at 778.619 kb on + strand at 778.619 kb on + strand at 778.619 kb on - strand at 778.620 kb on - strand at 778.620 kb on - strand at 778.620 kb on - strand at 778.620 kb on - strand at 778.620 kb on - strand at 778.645 kb on + strand at 778.645 kb on + strand at 778.645 kb on + strand at 778.645 kb on + strand at 778.646 kb on - strand at 778.665 kb on + strand at 778.665 kb on + strand at 778.666 kb on - strand at 778.666 kb on - strand at 778.666 kb on - strand at 778.666 kb on - strand at 778.673 kb on - strand at 778.781 kb on + strand at 778.782 kb on - strand at 778.782 kb on - strand at 778.782 kb on - strand at 778.782 kb on - strand at 778.805 kb on + strand at 778.805 kb on + strand at 778.805 kb on + strand at 778.805 kb on + strand at 778.806 kb on - strand at 778.806 kb on - strand at 778.879 kb on + strand at 778.879 kb on + strand at 778.880 kb on - strand at 778.911 kb on + strand at 778.912 kb on - strand at 778.912 kb on - strand at 778.926 kb on + strand at 778.926 kb on + strand at 778.926 kb on + strand at 778.926 kb on + strand at 778.926 kb on + strand at 778.926 kb on + strand at 778.926 kb on + strand at 778.926 kb on + strand at 778.926 kb on + strand at 778.927 kb on - strand at 778.927 kb on - strand at 778.927 kb on - strand at 778.927 kb on - strand at 778.927 kb on - strand at 779.029 kb on + strand, within IAI47_03730 at 779.029 kb on + strand, within IAI47_03730 at 779.029 kb on + strand, within IAI47_03730 at 779.030 kb on - strand, within IAI47_03730 at 779.030 kb on - strand, within IAI47_03730 at 779.151 kb on - strand, within IAI47_03730 at 779.151 kb on - strand, within IAI47_03730 at 779.151 kb on - strand, within IAI47_03730 at 779.151 kb on - strand, within IAI47_03730 at 779.154 kb on + strand, within IAI47_03730 at 779.154 kb on + strand, within IAI47_03730 at 779.154 kb on + strand, within IAI47_03730 at 779.154 kb on + strand, within IAI47_03730 at 779.154 kb on + strand, within IAI47_03730 at 779.155 kb on - strand, within IAI47_03730 at 779.155 kb on - strand, within IAI47_03730 at 779.155 kb on - strand, within IAI47_03730 at 779.155 kb on - strand, within IAI47_03730 at 779.155 kb on - strand, within IAI47_03730 at 779.160 kb on - strand, within IAI47_03730 at 779.160 kb on - strand, within IAI47_03730 at 779.160 kb on - strand, within IAI47_03730 at 779.160 kb on - strand, within IAI47_03730 at 779.165 kb on + strand, within IAI47_03730 at 779.165 kb on + strand, within IAI47_03730 at 779.166 kb on - strand, within IAI47_03730 at 779.166 kb on - strand, within IAI47_03730 at 779.166 kb on - strand, within IAI47_03730 at 779.189 kb on - strand, within IAI47_03730 at 779.239 kb on + strand, within IAI47_03730 at 779.240 kb on - strand, within IAI47_03730 at 779.240 kb on - strand, within IAI47_03730 at 779.240 kb on - strand, within IAI47_03730 at 779.286 kb on - strand, within IAI47_03730 at 779.286 kb on - strand, within IAI47_03730 at 779.336 kb on + strand, within IAI47_03730 at 779.336 kb on + strand, within IAI47_03730 at 779.347 kb on + strand, within IAI47_03730 at 779.347 kb on + strand, within IAI47_03730 at 779.347 kb on + strand, within IAI47_03730 at 779.347 kb on + strand, within IAI47_03730 at 779.348 kb on - strand, within IAI47_03730 at 779.348 kb on - strand, within IAI47_03730 at 779.351 kb on + strand, within IAI47_03730 at 779.351 kb on + strand, within IAI47_03730 at 779.352 kb on - strand, within IAI47_03730 at 779.352 kb on - strand, within IAI47_03730 at 779.352 kb on - strand, within IAI47_03730 at 779.424 kb on + strand at 779.425 kb on - strand at 779.425 kb on - strand at 779.451 kb on + strand at 779.451 kb on + strand at 779.451 kb on + strand at 779.452 kb on - strand at 779.452 kb on - strand at 779.452 kb on - strand at 779.452 kb on - strand at 779.459 kb on + strand at 779.502 kb on + strand at 779.503 kb on - strand at 779.503 kb on - strand at 779.503 kb on - strand at 779.521 kb on + strand at 779.522 kb on - strand at 779.522 kb on - strand at 779.522 kb on - strand at 779.522 kb on - strand at 779.523 kb on + strand at 779.523 kb on + strand at 779.523 kb on + strand at 779.523 kb on + strand at 779.523 kb on + strand at 779.523 kb on + strand at 779.523 kb on + strand at 779.523 kb on + strand at 779.523 kb on + strand at 779.524 kb on - strand at 779.524 kb on - strand at 779.524 kb on - strand at 779.524 kb on - strand at 779.524 kb on - strand at 779.524 kb on - strand at 779.524 kb on - strand at 779.524 kb on - strand at 779.585 kb on + strand at 779.593 kb on - strand at 779.593 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 776,401 + +1.2 776,401 + +1.8 776,402 - +0.3 776,402 - +2.6 776,402 - -2.2 776,403 + -1.0 776,403 + -0.9 776,406 + -1.5 776,406 + -2.2 776,406 + -1.6 776,406 + -1.5 776,434 + -0.0 776,434 + -1.2 776,440 + -1.1 776,440 + -2.7 776,440 + -1.9 776,440 + -0.5 776,440 + -1.9 777,091 + +0.0 777,092 - +0.3 777,132 - -1.8 777,132 - -0.3 777,181 + -2.0 777,181 + -2.1 777,182 - -0.3 777,182 - -1.4 777,182 - -1.9 777,182 - -0.9 777,182 - -0.3 777,182 - +1.6 777,182 - +0.0 777,182 - -1.3 777,190 + -0.5 777,190 + -1.1 777,190 + -1.0 777,190 + +0.3 777,191 - -2.2 777,191 - -0.5 777,191 - +0.5 777,255 + +0.5 777,255 + +0.8 777,255 + -1.4 777,256 - -1.5 777,256 - -0.7 777,256 - -2.2 777,256 - -0.3 777,256 - -2.9 777,256 - -0.7 777,256 - -2.9 777,256 - -1.8 777,256 - -1.7 777,300 + +1.1 777,345 + +1.5 777,346 - -1.6 777,346 - -1.3 777,346 - -0.9 777,346 - -4.8 777,346 - -2.9 777,346 - -3.5 777,346 - -2.8 777,346 - -3.3 777,350 + -1.4 777,350 + -1.7 777,350 + +0.1 777,350 + -2.6 777,351 - -1.2 777,351 - -3.5 777,351 - -2.6 777,351 - -1.6 777,351 - -1.2 777,372 - -1.5 777,372 - -2.7 777,393 + -1.3 777,393 + -2.9 777,394 - -1.3 777,394 - -1.2 777,394 - -1.1 777,394 - -1.2 777,394 - -4.2 777,394 - -4.0 777,394 - -4.0 777,410 - -0.8 777,410 - -0.5 777,410 - +0.3 777,415 + -0.6 777,415 + -2.8 777,415 + -2.8 777,415 + -3.0 777,415 + -3.4 777,415 + -1.0 777,416 - -0.8 777,416 - +0.1 777,416 - -1.6 777,416 - -3.3 777,476 + -1.5 777,476 + -3.0 777,476 + -3.0 777,476 + -0.9 777,476 + -2.0 777,477 - -4.3 777,477 - -1.9 777,477 - -0.6 777,479 - -1.3 777,479 - -2.9 777,523 - IAI47_03725 0.11 -4.0 777,555 + IAI47_03725 0.14 -4.3 777,808 - IAI47_03725 0.34 -2.2 777,847 + IAI47_03725 0.37 -2.7 777,857 + IAI47_03725 0.38 -1.8 777,908 + IAI47_03725 0.42 -4.9 777,920 + IAI47_03725 0.43 -2.9 777,920 + IAI47_03725 0.43 -2.7 777,921 - IAI47_03725 0.43 -3.4 777,921 - IAI47_03725 0.43 -1.8 777,921 - IAI47_03725 0.43 -3.9 777,964 - IAI47_03725 0.47 +0.7 777,964 - IAI47_03725 0.47 -4.0 778,039 + IAI47_03725 0.53 -1.4 778,039 + IAI47_03725 0.53 -1.3 778,040 - IAI47_03725 0.53 -3.6 778,040 - IAI47_03725 0.53 -2.7 778,110 + IAI47_03725 0.59 -1.5 778,111 - IAI47_03725 0.59 -2.6 778,147 + IAI47_03725 0.62 -1.9 778,148 - IAI47_03725 0.62 -3.0 778,148 - IAI47_03725 0.62 -2.3 778,148 - IAI47_03725 0.62 -2.5 778,148 - IAI47_03725 0.62 -1.8 778,213 + IAI47_03725 0.67 -2.9 778,213 + IAI47_03725 0.67 -3.1 778,213 + IAI47_03725 0.67 -2.1 778,214 - IAI47_03725 0.67 -2.7 778,214 - IAI47_03725 0.67 -2.2 778,230 - IAI47_03725 0.68 -3.7 778,325 + IAI47_03725 0.76 -1.4 778,325 + IAI47_03725 0.76 -2.6 778,326 - IAI47_03725 0.76 -2.1 778,399 + IAI47_03725 0.82 -2.3 778,400 - IAI47_03725 0.82 -2.3 778,400 - IAI47_03725 0.82 -2.1 778,493 + IAI47_03725 0.90 -3.5 778,494 - IAI47_03725 0.90 -2.0 778,494 - IAI47_03725 0.90 +1.7 778,520 + -1.9 778,520 + -0.4 778,520 + -1.2 778,520 + -1.4 778,520 + -1.9 778,520 + -3.6 778,521 - -3.6 778,521 - -4.7 778,521 - -0.9 778,594 + -2.5 778,594 + -1.9 778,595 - -1.9 778,597 + -1.1 778,597 + -4.7 778,598 - -2.8 778,598 - -3.1 778,598 - -2.4 778,598 - -1.1 778,616 + -1.5 778,616 + -0.7 778,616 + -2.5 778,616 + +0.0 778,617 - -0.0 778,617 - -0.6 778,619 + -1.7 778,619 + +2.0 778,619 + +2.2 778,619 - -3.3 778,620 - -0.8 778,620 - -0.1 778,620 - +0.6 778,620 - +0.7 778,620 - +0.9 778,645 + -0.8 778,645 + +0.1 778,645 + +0.3 778,645 + +1.5 778,646 - +0.1 778,665 + +0.6 778,665 + -0.3 778,666 - +0.4 778,666 - -0.8 778,666 - -0.9 778,666 - -0.7 778,673 - -1.0 778,781 + +1.0 778,782 - -1.1 778,782 - -1.4 778,782 - -1.1 778,782 - +1.7 778,805 + -0.4 778,805 + +0.5 778,805 + +1.5 778,805 + +2.1 778,806 - +2.1 778,806 - +0.8 778,879 + -1.2 778,879 + +0.2 778,880 - +1.1 778,911 + -2.3 778,912 - +0.5 778,912 - +1.4 778,926 + -0.2 778,926 + -0.8 778,926 + -1.1 778,926 + -0.7 778,926 + -0.6 778,926 + +0.1 778,926 + -2.6 778,926 + +0.2 778,926 + -1.1 778,927 - +0.3 778,927 - -0.3 778,927 - -0.3 778,927 - +2.9 778,927 - +0.4 779,029 + IAI47_03730 0.25 -1.7 779,029 + IAI47_03730 0.25 -1.3 779,029 + IAI47_03730 0.25 +0.3 779,030 - IAI47_03730 0.26 +0.7 779,030 - IAI47_03730 0.26 -1.0 779,151 - IAI47_03730 0.46 +0.2 779,151 - IAI47_03730 0.46 -1.1 779,151 - IAI47_03730 0.46 +0.3 779,151 - IAI47_03730 0.46 -2.4 779,154 + IAI47_03730 0.46 +0.2 779,154 + IAI47_03730 0.46 +1.3 779,154 + IAI47_03730 0.46 -0.7 779,154 + IAI47_03730 0.46 +0.6 779,154 + IAI47_03730 0.46 -0.5 779,155 - IAI47_03730 0.47 -1.5 779,155 - IAI47_03730 0.47 -0.1 779,155 - IAI47_03730 0.47 -1.0 779,155 - IAI47_03730 0.47 -2.0 779,155 - IAI47_03730 0.47 +0.6 779,160 - IAI47_03730 0.47 +1.2 779,160 - IAI47_03730 0.47 +0.4 779,160 - IAI47_03730 0.47 -0.6 779,160 - IAI47_03730 0.47 -1.4 779,165 + IAI47_03730 0.48 -0.9 779,165 + IAI47_03730 0.48 +0.1 779,166 - IAI47_03730 0.48 -1.5 779,166 - IAI47_03730 0.48 -0.4 779,166 - IAI47_03730 0.48 -0.6 779,189 - IAI47_03730 0.52 +1.0 779,239 + IAI47_03730 0.61 +0.1 779,240 - IAI47_03730 0.61 +0.6 779,240 - IAI47_03730 0.61 +0.2 779,240 - IAI47_03730 0.61 -1.0 779,286 - IAI47_03730 0.69 -0.1 779,286 - IAI47_03730 0.69 -0.2 779,336 + IAI47_03730 0.77 -1.4 779,336 + IAI47_03730 0.77 -2.5 779,347 + IAI47_03730 0.79 -0.2 779,347 + IAI47_03730 0.79 +1.2 779,347 + IAI47_03730 0.79 -0.6 779,347 + IAI47_03730 0.79 -0.1 779,348 - IAI47_03730 0.79 -0.4 779,348 - IAI47_03730 0.79 -0.8 779,351 + IAI47_03730 0.80 -0.6 779,351 + IAI47_03730 0.80 -1.8 779,352 - IAI47_03730 0.80 -0.6 779,352 - IAI47_03730 0.80 +0.7 779,352 - IAI47_03730 0.80 -0.4 779,424 + +1.5 779,425 - -0.4 779,425 - +0.8 779,451 + -1.5 779,451 + +0.6 779,451 + -2.2 779,452 - -1.9 779,452 - -0.3 779,452 - -1.4 779,452 - -0.3 779,459 + +0.2 779,502 + +0.7 779,503 - +2.2 779,503 - -0.1 779,503 - -0.8 779,521 + +2.9 779,522 - +0.6 779,522 - +1.1 779,522 - -2.2 779,522 - +1.3 779,523 + -0.9 779,523 + -0.3 779,523 + +0.8 779,523 + -1.8 779,523 + +0.5 779,523 + +0.2 779,523 + +0.5 779,523 + +0.5 779,523 + -0.7 779,524 - +0.0 779,524 - +1.1 779,524 - +1.7 779,524 - +0.7 779,524 - +0.2 779,524 - +0.1 779,524 - +0.2 779,524 - +0.6 779,585 + +0.3 779,593 - +0.1 779,593 - +0.2
Or see this region's nucleotide sequence