Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS01395 and BPHYT_RS01400 are separated by 692 nucleotides
BPHYT_RS01395: BPHYT_RS01395 - tRNA-Arg, at 318,058 to 318,147
_RS01395
BPHYT_RS01400: BPHYT_RS01400 - hypothetical protein, at 318,840 to 319,229
_RS01400
Position (kb) 318
319
320 Strain fitness (log2 ratio) -2
-1
0
1
2 at 317.903 kb on - strand at 317.903 kb on - strand at 317.960 kb on - strand at 317.982 kb on - strand at 317.982 kb on - strand at 317.982 kb on - strand at 317.982 kb on - strand at 318.004 kb on - strand at 318.103 kb on - strand, within BPHYT_RS01395 at 318.127 kb on - strand, within BPHYT_RS01395 at 318.127 kb on - strand, within BPHYT_RS01395 at 318.127 kb on - strand, within BPHYT_RS01395 at 318.218 kb on - strand at 318.325 kb on - strand at 318.339 kb on - strand at 318.339 kb on - strand at 318.341 kb on - strand at 318.445 kb on - strand at 318.494 kb on + strand at 318.494 kb on + strand at 318.549 kb on + strand at 318.550 kb on - strand at 318.692 kb on + strand at 318.693 kb on - strand at 318.693 kb on - strand at 318.738 kb on + strand at 318.738 kb on + strand at 318.739 kb on - strand at 318.739 kb on - strand at 318.798 kb on - strand at 318.856 kb on - strand at 318.969 kb on + strand, within BPHYT_RS01400 at 318.969 kb on + strand, within BPHYT_RS01400 at 318.969 kb on + strand, within BPHYT_RS01400 at 318.970 kb on - strand, within BPHYT_RS01400 at 318.970 kb on - strand, within BPHYT_RS01400 at 319.060 kb on + strand, within BPHYT_RS01400 at 319.107 kb on + strand, within BPHYT_RS01400 at 319.107 kb on + strand, within BPHYT_RS01400 at 319.108 kb on - strand, within BPHYT_RS01400 at 319.108 kb on - strand, within BPHYT_RS01400 at 319.111 kb on - strand, within BPHYT_RS01400 at 319.111 kb on - strand, within BPHYT_RS01400 at 319.111 kb on - strand, within BPHYT_RS01400 at 319.113 kb on + strand, within BPHYT_RS01400 at 319.113 kb on + strand, within BPHYT_RS01400 at 319.113 kb on + strand, within BPHYT_RS01400 at 319.113 kb on + strand, within BPHYT_RS01400 at 319.113 kb on + strand, within BPHYT_RS01400 at 319.114 kb on - strand, within BPHYT_RS01400 at 319.116 kb on + strand, within BPHYT_RS01400 at 319.116 kb on + strand, within BPHYT_RS01400 at 319.116 kb on + strand, within BPHYT_RS01400 at 319.116 kb on + strand, within BPHYT_RS01400 at 319.117 kb on - strand, within BPHYT_RS01400 at 319.117 kb on - strand, within BPHYT_RS01400 at 319.117 kb on - strand, within BPHYT_RS01400 at 319.117 kb on - strand, within BPHYT_RS01400 at 319.117 kb on - strand, within BPHYT_RS01400 at 319.232 kb on + strand at 319.233 kb on - strand at 319.233 kb on - strand at 319.233 kb on - strand at 319.305 kb on + strand at 319.305 kb on + strand at 319.306 kb on - strand at 319.308 kb on + strand at 319.308 kb on + strand at 319.308 kb on + strand at 319.308 kb on + strand at 319.309 kb on - strand at 319.309 kb on - strand at 319.320 kb on + strand at 319.321 kb on - strand at 319.321 kb on - strand at 319.362 kb on + strand at 319.401 kb on - strand at 319.408 kb on + strand at 319.408 kb on + strand at 319.408 kb on + strand at 319.408 kb on + strand at 319.409 kb on - strand at 319.409 kb on - strand at 319.409 kb on - strand at 319.409 kb on - strand at 319.540 kb on + strand at 319.540 kb on + strand at 319.541 kb on - strand at 319.541 kb on - strand at 319.541 kb on - strand at 319.541 kb on - strand at 319.541 kb on - strand at 319.543 kb on + strand at 319.544 kb on - strand at 319.628 kb on + strand at 319.628 kb on + strand at 319.628 kb on + strand at 319.683 kb on + strand at 319.683 kb on + strand at 319.683 kb on + strand at 319.683 kb on + strand at 319.683 kb on + strand at 319.684 kb on - strand at 319.715 kb on + strand at 319.723 kb on + strand at 319.723 kb on + strand at 319.723 kb on + strand at 319.823 kb on + strand at 319.823 kb on + strand at 319.823 kb on + strand at 319.824 kb on - strand at 320.022 kb on + strand at 320.022 kb on + strand at 320.022 kb on + strand at 320.022 kb on + strand at 320.022 kb on + strand at 320.023 kb on - strand at 320.026 kb on + strand at 320.027 kb on - strand at 320.027 kb on - strand at 320.027 kb on - strand at 320.027 kb on - strand at 320.030 kb on + strand at 320.031 kb on - strand at 320.031 kb on - strand at 320.031 kb on - strand at 320.031 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.191 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 317,903 - +0.1 317,903 - -0.5 317,960 - -2.3 317,982 - +0.5 317,982 - +0.3 317,982 - -0.4 317,982 - -0.6 318,004 - -0.1 318,103 - BPHYT_RS01395 0.50 -0.2 318,127 - BPHYT_RS01395 0.77 +0.5 318,127 - BPHYT_RS01395 0.77 +0.1 318,127 - BPHYT_RS01395 0.77 +2.0 318,218 - +0.2 318,325 - +0.9 318,339 - +0.9 318,339 - -0.0 318,341 - +0.7 318,445 - -0.3 318,494 + +1.2 318,494 + -0.0 318,549 + -0.3 318,550 - -0.3 318,692 + -0.3 318,693 - +0.3 318,693 - -0.2 318,738 + -0.4 318,738 + +0.2 318,739 - -0.4 318,739 - +0.1 318,798 - -0.8 318,856 - -0.0 318,969 + BPHYT_RS01400 0.33 +0.1 318,969 + BPHYT_RS01400 0.33 -0.2 318,969 + BPHYT_RS01400 0.33 -1.3 318,970 - BPHYT_RS01400 0.33 -1.1 318,970 - BPHYT_RS01400 0.33 -0.0 319,060 + BPHYT_RS01400 0.56 +0.4 319,107 + BPHYT_RS01400 0.68 +0.7 319,107 + BPHYT_RS01400 0.68 +0.3 319,108 - BPHYT_RS01400 0.69 -0.1 319,108 - BPHYT_RS01400 0.69 -0.6 319,111 - BPHYT_RS01400 0.69 -0.8 319,111 - BPHYT_RS01400 0.69 +0.1 319,111 - BPHYT_RS01400 0.69 -0.9 319,113 + BPHYT_RS01400 0.70 -0.8 319,113 + BPHYT_RS01400 0.70 +0.6 319,113 + BPHYT_RS01400 0.70 -2.6 319,113 + BPHYT_RS01400 0.70 +0.0 319,113 + BPHYT_RS01400 0.70 +1.5 319,114 - BPHYT_RS01400 0.70 +1.4 319,116 + BPHYT_RS01400 0.71 -0.1 319,116 + BPHYT_RS01400 0.71 -0.1 319,116 + BPHYT_RS01400 0.71 +0.4 319,116 + BPHYT_RS01400 0.71 -0.3 319,117 - BPHYT_RS01400 0.71 +1.1 319,117 - BPHYT_RS01400 0.71 -0.5 319,117 - BPHYT_RS01400 0.71 +1.1 319,117 - BPHYT_RS01400 0.71 -0.4 319,117 - BPHYT_RS01400 0.71 +1.0 319,232 + +0.8 319,233 - +0.0 319,233 - -0.7 319,233 - -0.8 319,305 + +2.3 319,305 + -0.4 319,306 - -1.7 319,308 + -0.4 319,308 + -0.6 319,308 + +0.1 319,308 + -0.3 319,309 - +0.8 319,309 - -1.5 319,320 + +0.5 319,321 - +0.3 319,321 - -1.0 319,362 + +0.4 319,401 - -0.7 319,408 + +0.0 319,408 + -1.9 319,408 + -0.1 319,408 + -1.4 319,409 - -0.1 319,409 - +1.3 319,409 - +0.2 319,409 - -1.4 319,540 + -0.0 319,540 + -0.6 319,541 - +0.2 319,541 - +0.1 319,541 - -0.9 319,541 - -0.5 319,541 - +1.1 319,543 + -1.0 319,544 - -0.1 319,628 + +1.0 319,628 + +0.7 319,628 + -0.5 319,683 + -0.2 319,683 + -1.8 319,683 + -0.4 319,683 + +0.2 319,683 + -0.5 319,684 - +0.0 319,715 + -0.3 319,723 + -0.2 319,723 + +0.0 319,723 + -0.4 319,823 + -0.2 319,823 + -0.4 319,823 + +0.1 319,824 - -0.3 320,022 + -0.0 320,022 + -0.3 320,022 + +0.8 320,022 + -0.2 320,022 + +0.4 320,023 - +0.2 320,026 + -0.6 320,027 - +0.5 320,027 - +0.4 320,027 - +0.3 320,027 - +0.0 320,030 + -0.1 320,031 - -0.5 320,031 - -0.3 320,031 - +0.9 320,031 - -0.5 320,188 - +0.3 320,188 - +0.8 320,188 - -0.7 320,188 - -1.8 320,191 - +0.2
Or see this region's nucleotide sequence