Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS00620 and BPHYT_RS00625 are separated by 672 nucleotides BPHYT_RS00625 and BPHYT_RS00630 overlap by 4 nucleotides
BPHYT_RS00620: BPHYT_RS00620 - hypothetical protein, at 147,730 to 148,308
_RS00620
BPHYT_RS00625: BPHYT_RS00625 - 3-oxoacyl-ACP synthase, at 148,981 to 149,907
_RS00625
BPHYT_RS00630: BPHYT_RS00630 - 3-oxoacyl-ACP synthase, at 149,904 to 150,965
_RS00630
Position (kb) 148
149
150 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 148.436 kb on + strand at 148.490 kb on + strand at 148.490 kb on + strand at 148.491 kb on - strand at 148.588 kb on - strand at 148.597 kb on + strand at 148.598 kb on - strand at 148.875 kb on + strand at 148.875 kb on + strand at 148.875 kb on + strand at 148.876 kb on - strand at 148.878 kb on + strand at 148.879 kb on - strand at 149.217 kb on + strand, within BPHYT_RS00625 at 149.233 kb on - strand, within BPHYT_RS00625 at 149.437 kb on + strand, within BPHYT_RS00625 at 149.437 kb on + strand, within BPHYT_RS00625 at 149.654 kb on - strand, within BPHYT_RS00625 at 149.654 kb on - strand, within BPHYT_RS00625 at 149.666 kb on + strand, within BPHYT_RS00625 at 149.667 kb on - strand, within BPHYT_RS00625 at 149.667 kb on - strand, within BPHYT_RS00625 at 149.697 kb on + strand, within BPHYT_RS00625 at 149.772 kb on - strand, within BPHYT_RS00625 at 149.772 kb on - strand, within BPHYT_RS00625 at 149.775 kb on + strand, within BPHYT_RS00625 at 149.775 kb on + strand, within BPHYT_RS00625 at 149.775 kb on + strand, within BPHYT_RS00625 at 149.775 kb on + strand, within BPHYT_RS00625 at 149.776 kb on - strand, within BPHYT_RS00625 at 149.776 kb on - strand, within BPHYT_RS00625 at 149.776 kb on - strand, within BPHYT_RS00625 at 149.776 kb on - strand, within BPHYT_RS00625 at 149.776 kb on - strand, within BPHYT_RS00625 at 149.777 kb on + strand, within BPHYT_RS00625 at 149.777 kb on + strand, within BPHYT_RS00625 at 149.777 kb on + strand, within BPHYT_RS00625 at 149.778 kb on - strand, within BPHYT_RS00625 at 149.778 kb on - strand, within BPHYT_RS00625 at 149.778 kb on - strand, within BPHYT_RS00625 at 149.887 kb on + strand at 150.060 kb on + strand, within BPHYT_RS00630 at 150.276 kb on - strand, within BPHYT_RS00630 at 150.450 kb on + strand, within BPHYT_RS00630 at 150.450 kb on + strand, within BPHYT_RS00630 at 150.617 kb on + strand, within BPHYT_RS00630 at 150.617 kb on + strand, within BPHYT_RS00630 at 150.617 kb on + strand, within BPHYT_RS00630 at 150.617 kb on + strand, within BPHYT_RS00630 at 150.617 kb on + strand, within BPHYT_RS00630 at 150.618 kb on - strand, within BPHYT_RS00630 at 150.823 kb on + strand, within BPHYT_RS00630
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 148,436 + +0.6 148,490 + +0.3 148,490 + -1.9 148,491 - +0.1 148,588 - +0.8 148,597 + -0.0 148,598 - +0.2 148,875 + -0.2 148,875 + +0.4 148,875 + +0.2 148,876 - -0.6 148,878 + +0.6 148,879 - -1.4 149,217 + BPHYT_RS00625 0.25 -0.3 149,233 - BPHYT_RS00625 0.27 -0.0 149,437 + BPHYT_RS00625 0.49 -0.4 149,437 + BPHYT_RS00625 0.49 +0.1 149,654 - BPHYT_RS00625 0.73 -0.1 149,654 - BPHYT_RS00625 0.73 +0.2 149,666 + BPHYT_RS00625 0.74 -1.8 149,667 - BPHYT_RS00625 0.74 -0.2 149,667 - BPHYT_RS00625 0.74 -1.2 149,697 + BPHYT_RS00625 0.77 -1.2 149,772 - BPHYT_RS00625 0.85 -1.2 149,772 - BPHYT_RS00625 0.85 -0.7 149,775 + BPHYT_RS00625 0.86 +0.0 149,775 + BPHYT_RS00625 0.86 +0.4 149,775 + BPHYT_RS00625 0.86 +0.1 149,775 + BPHYT_RS00625 0.86 +1.1 149,776 - BPHYT_RS00625 0.86 -0.2 149,776 - BPHYT_RS00625 0.86 +0.1 149,776 - BPHYT_RS00625 0.86 -0.5 149,776 - BPHYT_RS00625 0.86 +1.0 149,776 - BPHYT_RS00625 0.86 +1.4 149,777 + BPHYT_RS00625 0.86 -1.3 149,777 + BPHYT_RS00625 0.86 +0.6 149,777 + BPHYT_RS00625 0.86 -0.4 149,778 - BPHYT_RS00625 0.86 -2.8 149,778 - BPHYT_RS00625 0.86 -0.9 149,778 - BPHYT_RS00625 0.86 -0.2 149,887 + +0.0 150,060 + BPHYT_RS00630 0.15 +0.6 150,276 - BPHYT_RS00630 0.35 +1.4 150,450 + BPHYT_RS00630 0.51 -0.5 150,450 + BPHYT_RS00630 0.51 +0.0 150,617 + BPHYT_RS00630 0.67 -0.3 150,617 + BPHYT_RS00630 0.67 -1.6 150,617 + BPHYT_RS00630 0.67 +0.1 150,617 + BPHYT_RS00630 0.67 +0.3 150,617 + BPHYT_RS00630 0.67 +0.2 150,618 - BPHYT_RS00630 0.67 -0.2 150,823 + BPHYT_RS00630 0.87 +0.1
Or see this region's nucleotide sequence