Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_29315 and AO356_29320 overlap by 4 nucleotides AO356_29320 and AO356_29325 are separated by 416 nucleotides
AO356_29315: AO356_29315 - acyl-CoA dehydrogenase, at 6,817,481 to 6,818,668
_29315
AO356_29320: AO356_29320 - dihydrofolate reductase, at 6,818,665 to 6,819,624
_29320
AO356_29325: AO356_29325 - TonB-dependent receptor, at 6,820,041 to 6,822,173
_29325
Position (kb)
6818
6819
6820 Strain fitness (log2 ratio)
-1
0
1 at 6817.973 kb on + strand, within AO356_29315 at 6817.974 kb on - strand, within AO356_29315 at 6818.466 kb on - strand, within AO356_29315 at 6818.839 kb on + strand, within AO356_29320 at 6818.921 kb on - strand, within AO356_29320 at 6818.955 kb on + strand, within AO356_29320 at 6818.955 kb on + strand, within AO356_29320 at 6819.264 kb on - strand, within AO356_29320 at 6819.297 kb on + strand, within AO356_29320 at 6819.472 kb on + strand, within AO356_29320 at 6819.540 kb on - strand at 6819.608 kb on + strand at 6819.609 kb on - strand at 6819.609 kb on - strand at 6819.676 kb on + strand at 6819.676 kb on + strand at 6819.676 kb on + strand at 6819.676 kb on + strand at 6819.677 kb on - strand at 6819.677 kb on - strand at 6819.677 kb on - strand at 6819.677 kb on - strand at 6819.677 kb on - strand at 6819.677 kb on - strand at 6819.677 kb on - strand at 6819.677 kb on - strand at 6819.881 kb on - strand at 6820.022 kb on + strand at 6820.023 kb on - strand at 6820.308 kb on + strand, within AO356_29325 at 6820.309 kb on - strand, within AO356_29325 at 6820.324 kb on - strand, within AO356_29325 at 6820.395 kb on + strand, within AO356_29325 at 6820.395 kb on + strand, within AO356_29325 at 6820.395 kb on + strand, within AO356_29325 at 6820.396 kb on - strand, within AO356_29325 at 6820.396 kb on - strand, within AO356_29325 at 6820.396 kb on - strand, within AO356_29325 at 6820.396 kb on - strand, within AO356_29325 at 6820.396 kb on - strand, within AO356_29325 at 6820.396 kb on - strand, within AO356_29325 at 6820.572 kb on + strand, within AO356_29325 at 6820.572 kb on + strand, within AO356_29325 at 6820.572 kb on + strand, within AO356_29325 at 6820.573 kb on - strand, within AO356_29325
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 6,817,973 + AO356_29315 0.41 +0.3 6,817,974 - AO356_29315 0.41 +0.0 6,818,466 - AO356_29315 0.83 -0.5 6,818,839 + AO356_29320 0.18 -0.3 6,818,921 - AO356_29320 0.27 -0.1 6,818,955 + AO356_29320 0.30 -0.7 6,818,955 + AO356_29320 0.30 -0.6 6,819,264 - AO356_29320 0.62 -0.1 6,819,297 + AO356_29320 0.66 -0.0 6,819,472 + AO356_29320 0.84 -0.9 6,819,540 - -0.3 6,819,608 + +0.4 6,819,609 - +0.0 6,819,609 - +0.1 6,819,676 + -0.9 6,819,676 + +1.2 6,819,676 + -0.1 6,819,676 + -0.4 6,819,677 - +0.7 6,819,677 - +0.5 6,819,677 - +0.3 6,819,677 - +1.1 6,819,677 - +1.4 6,819,677 - -0.9 6,819,677 - +0.5 6,819,677 - -1.3 6,819,881 - -0.3 6,820,022 + +1.5 6,820,023 - -0.3 6,820,308 + AO356_29325 0.13 -0.1 6,820,309 - AO356_29325 0.13 +0.1 6,820,324 - AO356_29325 0.13 +0.8 6,820,395 + AO356_29325 0.17 -0.3 6,820,395 + AO356_29325 0.17 -0.7 6,820,395 + AO356_29325 0.17 -0.6 6,820,396 - AO356_29325 0.17 +1.2 6,820,396 - AO356_29325 0.17 +0.2 6,820,396 - AO356_29325 0.17 +0.4 6,820,396 - AO356_29325 0.17 -0.3 6,820,396 - AO356_29325 0.17 -0.3 6,820,396 - AO356_29325 0.17 -0.9 6,820,572 + AO356_29325 0.25 -0.2 6,820,572 + AO356_29325 0.25 +0.7 6,820,572 + AO356_29325 0.25 +0.5 6,820,573 - AO356_29325 0.25 +0.3
Or see this region's nucleotide sequence