Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_29320

Experiment: L-Histidine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_29315 and AO356_29320 overlap by 4 nucleotidesAO356_29320 and AO356_29325 are separated by 416 nucleotides AO356_29315: AO356_29315 - acyl-CoA dehydrogenase, at 6,817,481 to 6,818,668 _29315 AO356_29320: AO356_29320 - dihydrofolate reductase, at 6,818,665 to 6,819,624 _29320 AO356_29325: AO356_29325 - TonB-dependent receptor, at 6,820,041 to 6,822,173 _29325 Position (kb) 6818 6819 6820Strain fitness (log2 ratio) -1 0 1at 6817.973 kb on + strand, within AO356_29315at 6817.974 kb on - strand, within AO356_29315at 6818.466 kb on - strand, within AO356_29315at 6818.839 kb on + strand, within AO356_29320at 6818.921 kb on - strand, within AO356_29320at 6818.955 kb on + strand, within AO356_29320at 6818.955 kb on + strand, within AO356_29320at 6819.264 kb on - strand, within AO356_29320at 6819.297 kb on + strand, within AO356_29320at 6819.472 kb on + strand, within AO356_29320at 6819.540 kb on - strandat 6819.608 kb on + strandat 6819.609 kb on - strandat 6819.609 kb on - strandat 6819.676 kb on + strandat 6819.676 kb on + strandat 6819.676 kb on + strandat 6819.676 kb on + strandat 6819.677 kb on - strandat 6819.677 kb on - strandat 6819.677 kb on - strandat 6819.677 kb on - strandat 6819.677 kb on - strandat 6819.677 kb on - strandat 6819.677 kb on - strandat 6819.677 kb on - strandat 6819.881 kb on - strandat 6820.022 kb on + strandat 6820.023 kb on - strandat 6820.308 kb on + strand, within AO356_29325at 6820.309 kb on - strand, within AO356_29325at 6820.324 kb on - strand, within AO356_29325at 6820.395 kb on + strand, within AO356_29325at 6820.395 kb on + strand, within AO356_29325at 6820.395 kb on + strand, within AO356_29325at 6820.396 kb on - strand, within AO356_29325at 6820.396 kb on - strand, within AO356_29325at 6820.396 kb on - strand, within AO356_29325at 6820.396 kb on - strand, within AO356_29325at 6820.396 kb on - strand, within AO356_29325at 6820.396 kb on - strand, within AO356_29325at 6820.572 kb on + strand, within AO356_29325at 6820.572 kb on + strand, within AO356_29325at 6820.572 kb on + strand, within AO356_29325at 6820.573 kb on - strand, within AO356_29325

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (C)
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6,817,973 + AO356_29315 0.41 +0.3
6,817,974 - AO356_29315 0.41 +0.0
6,818,466 - AO356_29315 0.83 -0.5
6,818,839 + AO356_29320 0.18 -0.3
6,818,921 - AO356_29320 0.27 -0.1
6,818,955 + AO356_29320 0.30 -0.7
6,818,955 + AO356_29320 0.30 -0.6
6,819,264 - AO356_29320 0.62 -0.1
6,819,297 + AO356_29320 0.66 -0.0
6,819,472 + AO356_29320 0.84 -0.9
6,819,540 - -0.3
6,819,608 + +0.4
6,819,609 - +0.0
6,819,609 - +0.1
6,819,676 + -0.9
6,819,676 + +1.2
6,819,676 + -0.1
6,819,676 + -0.4
6,819,677 - +0.7
6,819,677 - +0.5
6,819,677 - +0.3
6,819,677 - +1.1
6,819,677 - +1.4
6,819,677 - -0.9
6,819,677 - +0.5
6,819,677 - -1.3
6,819,881 - -0.3
6,820,022 + +1.5
6,820,023 - -0.3
6,820,308 + AO356_29325 0.13 -0.1
6,820,309 - AO356_29325 0.13 +0.1
6,820,324 - AO356_29325 0.13 +0.8
6,820,395 + AO356_29325 0.17 -0.3
6,820,395 + AO356_29325 0.17 -0.7
6,820,395 + AO356_29325 0.17 -0.6
6,820,396 - AO356_29325 0.17 +1.2
6,820,396 - AO356_29325 0.17 +0.2
6,820,396 - AO356_29325 0.17 +0.4
6,820,396 - AO356_29325 0.17 -0.3
6,820,396 - AO356_29325 0.17 -0.3
6,820,396 - AO356_29325 0.17 -0.9
6,820,572 + AO356_29325 0.25 -0.2
6,820,572 + AO356_29325 0.25 +0.7
6,820,572 + AO356_29325 0.25 +0.5
6,820,573 - AO356_29325 0.25 +0.3

Or see this region's nucleotide sequence