Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27975 and AO356_27980 are separated by 5 nucleotides AO356_27980 and AO356_27985 are separated by 254 nucleotides
AO356_27975: AO356_27975 - hypothetical protein, at 6,387,597 to 6,387,923
_27975
AO356_27980: AO356_27980 - AraC family transcriptional regulator, at 6,387,929 to 6,388,849
_27980
AO356_27985: AO356_27985 - sorbitol dehydrogenase, at 6,389,104 to 6,389,877
_27985
Position (kb)
6387
6388
6389 Strain fitness (log2 ratio)
-1
0
1
2 at 6387.011 kb on + strand at 6387.021 kb on - strand at 6388.036 kb on + strand, within AO356_27980 at 6388.036 kb on + strand, within AO356_27980 at 6388.037 kb on - strand, within AO356_27980 at 6388.038 kb on + strand, within AO356_27980 at 6388.039 kb on - strand, within AO356_27980 at 6388.245 kb on + strand, within AO356_27980 at 6388.246 kb on - strand, within AO356_27980 at 6388.439 kb on - strand, within AO356_27980 at 6388.659 kb on + strand, within AO356_27980 at 6388.660 kb on - strand, within AO356_27980 at 6388.660 kb on - strand, within AO356_27980 at 6388.761 kb on + strand at 6388.864 kb on - strand at 6388.869 kb on + strand at 6388.884 kb on - strand at 6388.884 kb on - strand at 6388.933 kb on - strand at 6388.977 kb on + strand at 6389.413 kb on + strand, within AO356_27985 at 6389.414 kb on - strand, within AO356_27985 at 6389.561 kb on - strand, within AO356_27985 at 6389.827 kb on + strand at 6389.827 kb on + strand at 6389.827 kb on + strand at 6389.827 kb on + strand at 6389.827 kb on + strand at 6389.845 kb on + strand at 6389.845 kb on + strand at 6389.845 kb on + strand at 6389.845 kb on + strand at 6389.845 kb on + strand at 6389.845 kb on + strand at 6389.845 kb on + strand at 6389.845 kb on + strand at 6389.845 kb on + strand at 6389.846 kb on - strand at 6389.846 kb on - strand at 6389.846 kb on - strand at 6389.846 kb on - strand at 6389.846 kb on - strand at 6389.846 kb on - strand at 6389.846 kb on - strand at 6389.846 kb on - strand at 6389.846 kb on - strand at 6389.846 kb on - strand at 6389.846 kb on - strand at 6389.846 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 6,387,011 + +0.0 6,387,021 - -0.4 6,388,036 + AO356_27980 0.12 +0.1 6,388,036 + AO356_27980 0.12 +0.3 6,388,037 - AO356_27980 0.12 +0.7 6,388,038 + AO356_27980 0.12 +1.3 6,388,039 - AO356_27980 0.12 +0.8 6,388,245 + AO356_27980 0.34 +0.0 6,388,246 - AO356_27980 0.34 +2.0 6,388,439 - AO356_27980 0.55 +1.0 6,388,659 + AO356_27980 0.79 +0.1 6,388,660 - AO356_27980 0.79 +0.5 6,388,660 - AO356_27980 0.79 +0.5 6,388,761 + -0.1 6,388,864 - -1.1 6,388,869 + +0.7 6,388,884 - -0.3 6,388,884 - -0.2 6,388,933 - -1.2 6,388,977 + -0.9 6,389,413 + AO356_27985 0.40 +0.1 6,389,414 - AO356_27985 0.40 -0.1 6,389,561 - AO356_27985 0.59 -0.9 6,389,827 + +0.2 6,389,827 + +0.3 6,389,827 + +0.1 6,389,827 + -1.3 6,389,827 + +0.6 6,389,845 + +0.8 6,389,845 + +0.4 6,389,845 + +0.5 6,389,845 + -0.1 6,389,845 + -0.8 6,389,845 + +0.2 6,389,845 + +0.1 6,389,845 + +1.7 6,389,845 + +0.2 6,389,846 - -1.1 6,389,846 - -0.4 6,389,846 - -1.7 6,389,846 - -0.4 6,389,846 - -0.4 6,389,846 - +1.6 6,389,846 - -1.6 6,389,846 - +0.6 6,389,846 - +0.7 6,389,846 - -0.4 6,389,846 - +0.2 6,389,846 - +0.1
Or see this region's nucleotide sequence