Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16260 and AO356_16265 are separated by 316 nucleotides AO356_16265 and AO356_16270 are separated by 132 nucleotides AO356_16270 and AO356_16275 are separated by 10 nucleotides AO356_16275 and AO356_16280 are separated by 180 nucleotides
AO356_16260: AO356_16260 - ribosomal-protein-alanine acetyltransferase, at 3,676,999 to 3,677,451
_16260
AO356_16265: AO356_16265 - serine kinase/phosphatase, at 3,677,768 to 3,678,172
_16265
AO356_16270: AO356_16270 - carbonate dehydratase, at 3,678,305 to 3,678,949
_16270
AO356_16275: AO356_16275 - lysine methyltransferase, at 3,678,960 to 3,679,487
_16275
AO356_16280: AO356_16280 - hypothetical protein, at 3,679,668 to 3,680,837
_16280
Position (kb)
3678
3679 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3677.347 kb on + strand, within AO356_16260 at 3677.347 kb on + strand, within AO356_16260 at 3677.347 kb on + strand, within AO356_16260 at 3677.347 kb on + strand, within AO356_16260 at 3677.348 kb on - strand, within AO356_16260 at 3677.348 kb on - strand, within AO356_16260 at 3677.348 kb on - strand, within AO356_16260 at 3677.348 kb on - strand, within AO356_16260 at 3677.348 kb on - strand, within AO356_16260 at 3677.357 kb on - strand, within AO356_16260 at 3677.389 kb on + strand, within AO356_16260 at 3677.389 kb on + strand, within AO356_16260 at 3677.392 kb on + strand, within AO356_16260 at 3677.499 kb on + strand at 3677.499 kb on + strand at 3677.500 kb on - strand at 3677.500 kb on - strand at 3677.501 kb on + strand at 3677.502 kb on - strand at 3677.502 kb on - strand at 3677.502 kb on - strand at 3677.502 kb on - strand at 3677.502 kb on - strand at 3677.502 kb on - strand at 3677.629 kb on + strand at 3677.629 kb on + strand at 3677.629 kb on + strand at 3677.629 kb on + strand at 3677.629 kb on + strand at 3677.630 kb on - strand at 3678.185 kb on + strand at 3678.185 kb on + strand at 3678.185 kb on + strand at 3678.186 kb on - strand at 3678.186 kb on - strand at 3678.186 kb on - strand at 3678.186 kb on - strand at 3678.186 kb on - strand at 3678.186 kb on - strand at 3678.186 kb on - strand at 3678.198 kb on - strand at 3678.198 kb on - strand at 3678.198 kb on - strand at 3678.230 kb on - strand at 3678.288 kb on + strand at 3678.298 kb on - strand at 3678.315 kb on + strand at 3678.315 kb on + strand at 3678.315 kb on + strand at 3678.316 kb on - strand at 3678.331 kb on + strand at 3678.331 kb on + strand at 3678.331 kb on + strand at 3678.332 kb on - strand at 3678.332 kb on - strand at 3678.332 kb on - strand at 3678.413 kb on + strand, within AO356_16270 at 3678.413 kb on + strand, within AO356_16270 at 3678.414 kb on - strand, within AO356_16270 at 3678.551 kb on + strand, within AO356_16270 at 3678.551 kb on + strand, within AO356_16270 at 3678.599 kb on + strand, within AO356_16270 at 3678.683 kb on + strand, within AO356_16270 at 3678.683 kb on + strand, within AO356_16270 at 3678.683 kb on + strand, within AO356_16270 at 3678.684 kb on - strand, within AO356_16270 at 3678.684 kb on - strand, within AO356_16270 at 3678.684 kb on - strand, within AO356_16270 at 3678.686 kb on + strand, within AO356_16270 at 3678.686 kb on + strand, within AO356_16270 at 3678.686 kb on + strand, within AO356_16270 at 3678.686 kb on + strand, within AO356_16270 at 3678.687 kb on - strand, within AO356_16270 at 3678.714 kb on + strand, within AO356_16270 at 3678.715 kb on - strand, within AO356_16270 at 3678.771 kb on + strand, within AO356_16270 at 3678.772 kb on - strand, within AO356_16270 at 3678.787 kb on + strand, within AO356_16270 at 3678.788 kb on - strand, within AO356_16270 at 3678.788 kb on - strand, within AO356_16270 at 3678.848 kb on + strand, within AO356_16270 at 3678.848 kb on + strand, within AO356_16270 at 3678.848 kb on + strand, within AO356_16270 at 3678.848 kb on + strand, within AO356_16270 at 3678.848 kb on + strand, within AO356_16270 at 3678.848 kb on + strand, within AO356_16270 at 3678.848 kb on + strand, within AO356_16270 at 3678.920 kb on + strand at 3678.994 kb on - strand at 3679.030 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.057 kb on + strand, within AO356_16275 at 3679.058 kb on - strand, within AO356_16275 at 3679.058 kb on - strand, within AO356_16275 at 3679.058 kb on - strand, within AO356_16275 at 3679.058 kb on - strand, within AO356_16275 at 3679.058 kb on - strand, within AO356_16275 at 3679.058 kb on - strand, within AO356_16275 at 3679.087 kb on + strand, within AO356_16275 at 3679.111 kb on + strand, within AO356_16275 at 3679.111 kb on + strand, within AO356_16275 at 3679.112 kb on - strand, within AO356_16275 at 3679.185 kb on + strand, within AO356_16275 at 3679.185 kb on + strand, within AO356_16275 at 3679.185 kb on + strand, within AO356_16275 at 3679.185 kb on + strand, within AO356_16275 at 3679.186 kb on - strand, within AO356_16275 at 3679.186 kb on - strand, within AO356_16275 at 3679.186 kb on - strand, within AO356_16275 at 3679.186 kb on - strand, within AO356_16275 at 3679.186 kb on - strand, within AO356_16275 at 3679.234 kb on + strand, within AO356_16275 at 3679.234 kb on + strand, within AO356_16275 at 3679.234 kb on + strand, within AO356_16275 at 3679.234 kb on + strand, within AO356_16275 at 3679.234 kb on + strand, within AO356_16275 at 3679.234 kb on + strand, within AO356_16275 at 3679.234 kb on + strand, within AO356_16275 at 3679.234 kb on + strand, within AO356_16275 at 3679.234 kb on + strand, within AO356_16275 at 3679.234 kb on + strand, within AO356_16275 at 3679.234 kb on + strand, within AO356_16275 at 3679.234 kb on + strand, within AO356_16275 at 3679.234 kb on + strand, within AO356_16275 at 3679.234 kb on + strand, within AO356_16275 at 3679.235 kb on - strand, within AO356_16275 at 3679.235 kb on - strand, within AO356_16275 at 3679.235 kb on - strand, within AO356_16275 at 3679.235 kb on - strand, within AO356_16275 at 3679.235 kb on - strand, within AO356_16275 at 3679.235 kb on - strand, within AO356_16275 at 3679.235 kb on - strand, within AO356_16275 at 3679.235 kb on - strand, within AO356_16275 at 3679.235 kb on - strand, within AO356_16275 at 3679.235 kb on - strand, within AO356_16275 at 3679.235 kb on - strand, within AO356_16275 at 3679.235 kb on - strand, within AO356_16275 at 3679.235 kb on - strand, within AO356_16275 at 3679.235 kb on - strand, within AO356_16275 at 3679.435 kb on + strand at 3679.436 kb on - strand at 3679.506 kb on + strand at 3679.506 kb on + strand at 3679.507 kb on - strand at 3679.507 kb on - strand at 3679.507 kb on - strand at 3679.507 kb on - strand at 3679.566 kb on - strand at 3679.589 kb on + strand at 3679.589 kb on + strand at 3679.593 kb on + strand at 3679.593 kb on + strand at 3679.593 kb on + strand at 3679.593 kb on + strand at 3679.593 kb on + strand at 3679.593 kb on + strand at 3679.593 kb on + strand at 3679.593 kb on + strand at 3679.594 kb on - strand at 3679.594 kb on - strand at 3679.594 kb on - strand at 3679.594 kb on - strand at 3679.594 kb on - strand at 3679.594 kb on - strand at 3679.594 kb on - strand at 3679.645 kb on + strand at 3679.646 kb on - strand at 3679.669 kb on + strand at 3679.670 kb on - strand at 3679.670 kb on - strand at 3679.704 kb on - strand at 3679.704 kb on - strand at 3679.786 kb on + strand, within AO356_16280 at 3679.787 kb on - strand, within AO356_16280 at 3679.787 kb on - strand, within AO356_16280 at 3679.787 kb on - strand, within AO356_16280 at 3679.787 kb on - strand, within AO356_16280 at 3679.787 kb on - strand, within AO356_16280
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 3,677,347 + AO356_16260 0.77 +1.5 3,677,347 + AO356_16260 0.77 +1.7 3,677,347 + AO356_16260 0.77 -0.1 3,677,347 + AO356_16260 0.77 +1.4 3,677,348 - AO356_16260 0.77 +0.4 3,677,348 - AO356_16260 0.77 +1.3 3,677,348 - AO356_16260 0.77 +1.9 3,677,348 - AO356_16260 0.77 +2.0 3,677,348 - AO356_16260 0.77 -0.2 3,677,357 - AO356_16260 0.79 +2.3 3,677,389 + AO356_16260 0.86 +0.8 3,677,389 + AO356_16260 0.86 +0.4 3,677,392 + AO356_16260 0.87 +0.6 3,677,499 + +0.0 3,677,499 + -0.1 3,677,500 - +0.2 3,677,500 - +0.7 3,677,501 + +0.5 3,677,502 - +0.9 3,677,502 - +0.1 3,677,502 - -2.1 3,677,502 - -0.8 3,677,502 - -0.1 3,677,502 - +0.4 3,677,629 + +0.1 3,677,629 + -0.1 3,677,629 + -0.1 3,677,629 + +0.2 3,677,629 + -0.4 3,677,630 - +0.7 3,678,185 + -0.1 3,678,185 + +0.9 3,678,185 + +0.3 3,678,186 - +0.3 3,678,186 - -0.7 3,678,186 - +1.3 3,678,186 - +0.2 3,678,186 - +0.8 3,678,186 - +1.1 3,678,186 - +0.8 3,678,198 - +0.7 3,678,198 - +0.9 3,678,198 - -0.8 3,678,230 - +0.4 3,678,288 + +0.2 3,678,298 - -0.7 3,678,315 + -0.6 3,678,315 + -0.4 3,678,315 + -0.5 3,678,316 - +0.2 3,678,331 + -0.7 3,678,331 + +0.1 3,678,331 + +0.2 3,678,332 - +1.0 3,678,332 - -0.4 3,678,332 - +0.9 3,678,413 + AO356_16270 0.17 -0.2 3,678,413 + AO356_16270 0.17 -0.1 3,678,414 - AO356_16270 0.17 -0.5 3,678,551 + AO356_16270 0.38 +0.3 3,678,551 + AO356_16270 0.38 +0.2 3,678,599 + AO356_16270 0.46 +0.1 3,678,683 + AO356_16270 0.59 +2.1 3,678,683 + AO356_16270 0.59 +1.2 3,678,683 + AO356_16270 0.59 +0.1 3,678,684 - AO356_16270 0.59 +1.2 3,678,684 - AO356_16270 0.59 +0.4 3,678,684 - AO356_16270 0.59 +0.4 3,678,686 + AO356_16270 0.59 -0.1 3,678,686 + AO356_16270 0.59 +0.5 3,678,686 + AO356_16270 0.59 +0.5 3,678,686 + AO356_16270 0.59 -0.0 3,678,687 - AO356_16270 0.59 -0.2 3,678,714 + AO356_16270 0.63 +0.4 3,678,715 - AO356_16270 0.64 +0.1 3,678,771 + AO356_16270 0.72 -1.0 3,678,772 - AO356_16270 0.72 +0.2 3,678,787 + AO356_16270 0.75 +0.5 3,678,788 - AO356_16270 0.75 +0.3 3,678,788 - AO356_16270 0.75 +1.1 3,678,848 + AO356_16270 0.84 -3.2 3,678,848 + AO356_16270 0.84 +0.7 3,678,848 + AO356_16270 0.84 +1.2 3,678,848 + AO356_16270 0.84 -0.4 3,678,848 + AO356_16270 0.84 +0.6 3,678,848 + AO356_16270 0.84 +0.4 3,678,848 + AO356_16270 0.84 +0.7 3,678,920 + -0.3 3,678,994 - -0.5 3,679,030 + AO356_16275 0.13 +0.4 3,679,057 + AO356_16275 0.18 +0.3 3,679,057 + AO356_16275 0.18 -0.4 3,679,057 + AO356_16275 0.18 +0.4 3,679,057 + AO356_16275 0.18 +0.1 3,679,057 + AO356_16275 0.18 +1.8 3,679,057 + AO356_16275 0.18 +0.4 3,679,057 + AO356_16275 0.18 +0.6 3,679,057 + AO356_16275 0.18 +0.4 3,679,058 - AO356_16275 0.19 +2.6 3,679,058 - AO356_16275 0.19 +0.7 3,679,058 - AO356_16275 0.19 +0.4 3,679,058 - AO356_16275 0.19 -0.1 3,679,058 - AO356_16275 0.19 -0.3 3,679,058 - AO356_16275 0.19 +0.6 3,679,087 + AO356_16275 0.24 -0.6 3,679,111 + AO356_16275 0.29 +1.1 3,679,111 + AO356_16275 0.29 +0.1 3,679,112 - AO356_16275 0.29 -0.3 3,679,185 + AO356_16275 0.43 -0.1 3,679,185 + AO356_16275 0.43 +0.9 3,679,185 + AO356_16275 0.43 -0.9 3,679,185 + AO356_16275 0.43 +0.8 3,679,186 - AO356_16275 0.43 -0.1 3,679,186 - AO356_16275 0.43 -0.6 3,679,186 - AO356_16275 0.43 +0.4 3,679,186 - AO356_16275 0.43 +1.0 3,679,186 - AO356_16275 0.43 +0.6 3,679,234 + AO356_16275 0.52 +0.1 3,679,234 + AO356_16275 0.52 -1.4 3,679,234 + AO356_16275 0.52 -0.5 3,679,234 + AO356_16275 0.52 +0.6 3,679,234 + AO356_16275 0.52 +0.3 3,679,234 + AO356_16275 0.52 -1.9 3,679,234 + AO356_16275 0.52 -0.1 3,679,234 + AO356_16275 0.52 +0.2 3,679,234 + AO356_16275 0.52 +0.3 3,679,234 + AO356_16275 0.52 +0.2 3,679,234 + AO356_16275 0.52 +0.2 3,679,234 + AO356_16275 0.52 +1.6 3,679,234 + AO356_16275 0.52 -0.8 3,679,234 + AO356_16275 0.52 +0.1 3,679,235 - AO356_16275 0.52 +0.4 3,679,235 - AO356_16275 0.52 -0.7 3,679,235 - AO356_16275 0.52 +0.9 3,679,235 - AO356_16275 0.52 +0.7 3,679,235 - AO356_16275 0.52 -0.8 3,679,235 - AO356_16275 0.52 +0.1 3,679,235 - AO356_16275 0.52 -1.4 3,679,235 - AO356_16275 0.52 +0.2 3,679,235 - AO356_16275 0.52 -0.0 3,679,235 - AO356_16275 0.52 -0.1 3,679,235 - AO356_16275 0.52 -0.0 3,679,235 - AO356_16275 0.52 +1.0 3,679,235 - AO356_16275 0.52 +0.3 3,679,235 - AO356_16275 0.52 +0.2 3,679,435 + -0.3 3,679,436 - -0.6 3,679,506 + -1.4 3,679,506 + +0.4 3,679,507 - -0.2 3,679,507 - +1.7 3,679,507 - +0.5 3,679,507 - +0.1 3,679,566 - -2.0 3,679,589 + +0.8 3,679,589 + +0.5 3,679,593 + -0.3 3,679,593 + +0.5 3,679,593 + +0.3 3,679,593 + -0.5 3,679,593 + +0.0 3,679,593 + +0.3 3,679,593 + +0.9 3,679,593 + +0.6 3,679,594 - -0.7 3,679,594 - +0.2 3,679,594 - +0.4 3,679,594 - +0.7 3,679,594 - -0.6 3,679,594 - -0.2 3,679,594 - +1.6 3,679,645 + -0.4 3,679,646 - -0.4 3,679,669 + +0.6 3,679,670 - -0.5 3,679,670 - -0.4 3,679,704 - +0.1 3,679,704 - +0.8 3,679,786 + AO356_16280 0.10 -0.0 3,679,787 - AO356_16280 0.10 -0.9 3,679,787 - AO356_16280 0.10 +0.1 3,679,787 - AO356_16280 0.10 +0.4 3,679,787 - AO356_16280 0.10 -0.2 3,679,787 - AO356_16280 0.10 +0.1
Or see this region's nucleotide sequence