Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01125 and AO356_01130 overlap by 4 nucleotides AO356_01130 and AO356_01135 are separated by 292 nucleotides AO356_01135 and AO356_01140 are separated by 376 nucleotides
AO356_01125: AO356_01125 - ABC transporter permease, at 256,158 to 258,629
_01125
AO356_01130: AO356_01130 - ABC transporter ATP-binding protein, at 258,626 to 259,294
_01130
AO356_01135: AO356_01135 - sulfatase, at 259,587 to 261,284
_01135
AO356_01140: AO356_01140 - UDP-glucose 6-dehydrogenase, at 261,661 to 263,025
_01140
Position (kb) 259
260
261
262 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 259.264 kb on - strand at 259.270 kb on + strand at 259.270 kb on + strand at 259.270 kb on + strand at 259.270 kb on + strand at 259.270 kb on + strand at 259.271 kb on - strand at 259.271 kb on - strand at 259.272 kb on + strand at 259.380 kb on + strand at 259.380 kb on + strand at 259.381 kb on - strand at 259.451 kb on + strand at 259.451 kb on + strand at 259.451 kb on + strand at 259.515 kb on + strand at 259.516 kb on - strand at 259.516 kb on - strand at 259.581 kb on - strand at 259.582 kb on + strand at 259.583 kb on - strand at 259.583 kb on - strand at 259.649 kb on + strand at 259.649 kb on + strand at 259.649 kb on + strand at 259.649 kb on + strand at 259.649 kb on + strand at 259.804 kb on + strand, within AO356_01135 at 259.805 kb on - strand, within AO356_01135 at 259.805 kb on - strand, within AO356_01135 at 259.805 kb on - strand, within AO356_01135 at 259.934 kb on + strand, within AO356_01135 at 259.934 kb on + strand, within AO356_01135 at 259.984 kb on + strand, within AO356_01135 at 259.984 kb on + strand, within AO356_01135 at 259.985 kb on - strand, within AO356_01135 at 259.985 kb on - strand, within AO356_01135 at 260.069 kb on - strand, within AO356_01135 at 260.173 kb on + strand, within AO356_01135 at 260.173 kb on + strand, within AO356_01135 at 260.174 kb on - strand, within AO356_01135 at 260.174 kb on - strand, within AO356_01135 at 260.195 kb on - strand, within AO356_01135 at 260.407 kb on + strand, within AO356_01135 at 260.408 kb on - strand, within AO356_01135 at 260.476 kb on + strand, within AO356_01135 at 260.476 kb on + strand, within AO356_01135 at 260.476 kb on + strand, within AO356_01135 at 260.476 kb on + strand, within AO356_01135 at 260.476 kb on + strand, within AO356_01135 at 260.477 kb on - strand, within AO356_01135 at 260.477 kb on - strand, within AO356_01135 at 260.477 kb on - strand, within AO356_01135 at 260.564 kb on + strand, within AO356_01135 at 260.629 kb on + strand, within AO356_01135 at 260.630 kb on - strand, within AO356_01135 at 260.630 kb on - strand, within AO356_01135 at 260.630 kb on - strand, within AO356_01135 at 260.744 kb on - strand, within AO356_01135 at 260.744 kb on - strand, within AO356_01135 at 260.776 kb on + strand, within AO356_01135 at 260.776 kb on + strand, within AO356_01135 at 260.777 kb on - strand, within AO356_01135 at 260.777 kb on - strand, within AO356_01135 at 260.872 kb on + strand, within AO356_01135 at 260.873 kb on - strand, within AO356_01135 at 261.002 kb on - strand, within AO356_01135 at 261.034 kb on + strand, within AO356_01135 at 261.034 kb on + strand, within AO356_01135 at 261.034 kb on + strand, within AO356_01135 at 261.035 kb on - strand, within AO356_01135 at 261.035 kb on - strand, within AO356_01135 at 261.035 kb on - strand, within AO356_01135 at 261.035 kb on - strand, within AO356_01135 at 261.035 kb on - strand, within AO356_01135 at 261.055 kb on + strand, within AO356_01135 at 261.055 kb on + strand, within AO356_01135 at 261.056 kb on - strand, within AO356_01135 at 261.056 kb on - strand, within AO356_01135 at 261.123 kb on + strand at 261.123 kb on + strand at 261.123 kb on + strand at 261.124 kb on - strand at 261.124 kb on - strand at 261.124 kb on - strand at 261.127 kb on + strand at 261.127 kb on + strand at 261.127 kb on + strand at 261.127 kb on + strand at 261.127 kb on + strand at 261.224 kb on - strand at 261.226 kb on + strand at 261.226 kb on + strand at 261.226 kb on + strand at 261.226 kb on + strand at 261.227 kb on - strand at 261.232 kb on + strand at 261.335 kb on - strand at 261.466 kb on + strand at 261.611 kb on + strand at 261.631 kb on - strand at 261.631 kb on - strand at 261.674 kb on + strand at 261.674 kb on + strand at 261.674 kb on + strand at 261.674 kb on + strand at 261.674 kb on + strand at 261.689 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 259,264 - -1.2 259,270 + -2.4 259,270 + -0.1 259,270 + -1.3 259,270 + -1.8 259,270 + -0.7 259,271 - -0.4 259,271 - -0.9 259,272 + +1.1 259,380 + -1.4 259,380 + -0.0 259,381 - -0.5 259,451 + -0.5 259,451 + -1.6 259,451 + +0.8 259,515 + -2.9 259,516 - +0.9 259,516 - +0.3 259,581 - -0.4 259,582 + -0.2 259,583 - -1.2 259,583 - -0.1 259,649 + -1.4 259,649 + -0.0 259,649 + +1.0 259,649 + -0.6 259,649 + +0.1 259,804 + AO356_01135 0.13 +0.4 259,805 - AO356_01135 0.13 +1.2 259,805 - AO356_01135 0.13 +0.3 259,805 - AO356_01135 0.13 -0.5 259,934 + AO356_01135 0.20 +0.9 259,934 + AO356_01135 0.20 -1.4 259,984 + AO356_01135 0.23 +0.1 259,984 + AO356_01135 0.23 -0.7 259,985 - AO356_01135 0.23 -0.5 259,985 - AO356_01135 0.23 -0.4 260,069 - AO356_01135 0.28 -0.5 260,173 + AO356_01135 0.35 -1.2 260,173 + AO356_01135 0.35 -0.2 260,174 - AO356_01135 0.35 -1.3 260,174 - AO356_01135 0.35 -0.2 260,195 - AO356_01135 0.36 +0.7 260,407 + AO356_01135 0.48 -1.2 260,408 - AO356_01135 0.48 +0.6 260,476 + AO356_01135 0.52 -0.2 260,476 + AO356_01135 0.52 +0.9 260,476 + AO356_01135 0.52 -0.4 260,476 + AO356_01135 0.52 -1.1 260,476 + AO356_01135 0.52 -1.4 260,477 - AO356_01135 0.52 +0.9 260,477 - AO356_01135 0.52 +1.3 260,477 - AO356_01135 0.52 -0.9 260,564 + AO356_01135 0.58 +0.0 260,629 + AO356_01135 0.61 -0.9 260,630 - AO356_01135 0.61 -0.4 260,630 - AO356_01135 0.61 -0.9 260,630 - AO356_01135 0.61 +0.2 260,744 - AO356_01135 0.68 -0.6 260,744 - AO356_01135 0.68 +1.1 260,776 + AO356_01135 0.70 -0.6 260,776 + AO356_01135 0.70 +0.8 260,777 - AO356_01135 0.70 +0.9 260,777 - AO356_01135 0.70 +0.4 260,872 + AO356_01135 0.76 -1.1 260,873 - AO356_01135 0.76 -0.9 261,002 - AO356_01135 0.83 -0.8 261,034 + AO356_01135 0.85 -1.9 261,034 + AO356_01135 0.85 -2.1 261,034 + AO356_01135 0.85 +0.7 261,035 - AO356_01135 0.85 -1.2 261,035 - AO356_01135 0.85 +0.5 261,035 - AO356_01135 0.85 -1.0 261,035 - AO356_01135 0.85 +0.5 261,035 - AO356_01135 0.85 -0.0 261,055 + AO356_01135 0.86 -0.7 261,055 + AO356_01135 0.86 -0.2 261,056 - AO356_01135 0.87 +0.7 261,056 - AO356_01135 0.87 +0.1 261,123 + +0.3 261,123 + -0.5 261,123 + -1.3 261,124 - -0.0 261,124 - +0.3 261,124 - -0.4 261,127 + +0.9 261,127 + -1.4 261,127 + +0.2 261,127 + +0.7 261,127 + -0.3 261,224 - +0.1 261,226 + +0.0 261,226 + +0.3 261,226 + -1.2 261,226 + -0.6 261,227 - +0.0 261,232 + +1.0 261,335 - +1.4 261,466 + +0.1 261,611 + -0.3 261,631 - -0.2 261,631 - +0.8 261,674 + -1.3 261,674 + +0.3 261,674 + +0.4 261,674 + -0.8 261,674 + +0.1 261,689 - -0.3
Or see this region's nucleotide sequence