Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11345

Experiment: R2A pH6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A pH6
2,513,600	+				-0.4
2,513,600	+				+1.1
2,513,600	+				-0.6
2,513,600	+				-0.8
2,513,600	+				+0.1
2,513,600	+				+1.2
2,513,600	+				-0.1
2,513,600	+				-1.1
2,513,601	-				+1.0
2,513,601	-				-1.3
2,513,601	-				-3.2
2,513,601	-				+0.4
2,513,601	-				+0.6
2,513,601	-				-1.5
2,513,710	+				-0.8
2,513,710	+				-1.0
2,513,710	+				+0.5
2,513,710	+				+0.3
2,513,710	+				+0.0
2,513,710	+				-0.1
2,513,710	+				-0.5
2,513,710	+				-0.7
2,513,710	+				-0.8
2,513,710	+				-0.9
2,513,710	+				-0.6
2,513,710	+				-1.2
2,513,710	+				+0.8
2,513,710	+				-1.3
2,513,710	+				-1.1
2,513,710	+				+1.0
2,513,710	+				-0.4
2,513,710	+				-0.3
2,513,710	+				-1.1
2,513,710	+				-0.3
2,513,710	+				+0.0
2,513,711	-				+1.0
2,513,711	-				+0.8
2,513,711	-				+0.1
2,513,711	-				-1.6
2,513,711	-				-0.5
2,513,711	-				+1.4
2,513,711	-				-0.8
2,513,711	-				+1.5
2,513,711	-				-0.4
2,513,711	-				-2.5
2,513,711	-				+0.1
2,513,711	-				-0.3
2,513,711	-				-0.7
2,513,711	-				+0.4
2,513,711	-				+1.4
2,513,711	-				-0.5
2,513,714	+				-1.2
2,513,714	+				+0.4
2,513,714	+				+1.6
2,513,714	+				+1.7
2,513,714	+				-0.4
2,513,714	+				-0.4
2,513,714	+				-1.4
2,513,714	+				+0.3
2,513,715	-				-0.7
2,513,715	-				+0.2
2,513,715	-				+0.3
2,513,715	-				-0.6
2,513,715	-				+0.4
2,513,715	-				+0.3
2,513,715	-				+1.7
2,513,715	-				+0.1
2,513,715	-				+0.2
2,513,715	-				-0.1
2,513,848	+		LRK54_RS11340	0.24	-2.1
2,513,848	+		LRK54_RS11340	0.24	-0.8
2,513,848	+		LRK54_RS11340	0.24	+0.6
2,513,848	+		LRK54_RS11340	0.24	+0.1
2,513,848	+		LRK54_RS11340	0.24	+0.6
2,513,848	+		LRK54_RS11340	0.24	+0.3
2,513,848	+		LRK54_RS11340	0.24	-1.4
2,513,848	+		LRK54_RS11340	0.24	-0.2
2,513,848	+		LRK54_RS11340	0.24	+3.4
2,513,848	+		LRK54_RS11340	0.24	-0.4
2,513,848	+		LRK54_RS11340	0.24	+0.4
2,513,848	+		LRK54_RS11340	0.24	-0.0
2,513,848	+		LRK54_RS11340	0.24	+1.6
2,513,848	+		LRK54_RS11340	0.24	+0.3
2,513,848	+		LRK54_RS11340	0.24	-0.4
2,513,848	+		LRK54_RS11340	0.24	-0.7
2,513,848	+		LRK54_RS11340	0.24	+0.4
2,513,849	-		LRK54_RS11340	0.24	+2.4
2,513,849	-		LRK54_RS11340	0.24	+0.1
2,513,849	-		LRK54_RS11340	0.24	+0.6
2,513,849	-		LRK54_RS11340	0.24	+1.6
2,513,849	-		LRK54_RS11340	0.24	+0.4
2,513,849	-		LRK54_RS11340	0.24	-1.7
2,513,849	-		LRK54_RS11340	0.24	-1.3
2,513,849	-		LRK54_RS11340	0.24	-0.8
2,513,849	-		LRK54_RS11340	0.24	+0.8
2,513,849	-		LRK54_RS11340	0.24	-1.5
2,513,849	-		LRK54_RS11340	0.24	+0.1
2,513,849	-		LRK54_RS11340	0.24	+0.6
2,513,849	-		LRK54_RS11340	0.24	+0.2
2,513,902	+		LRK54_RS11340	0.29	-0.3
2,513,902	+		LRK54_RS11340	0.29	-2.7
2,513,902	+		LRK54_RS11340	0.29	+0.0
2,513,902	+		LRK54_RS11340	0.29	+1.0
2,513,902	+		LRK54_RS11340	0.29	-0.2
2,513,902	+		LRK54_RS11340	0.29	-0.1
2,513,902	+		LRK54_RS11340	0.29	+1.4
2,513,902	+		LRK54_RS11340	0.29	-0.3
2,513,902	+		LRK54_RS11340	0.29	+0.4
2,513,902	+		LRK54_RS11340	0.29	+0.4
2,513,902	+		LRK54_RS11340	0.29	+0.1
2,513,902	+		LRK54_RS11340	0.29	+0.6
2,513,902	+		LRK54_RS11340	0.29	-0.3
2,513,902	+		LRK54_RS11340	0.29	+0.0
2,513,902	+		LRK54_RS11340	0.29	-1.6
2,513,902	+		LRK54_RS11340	0.29	+0.8
2,513,902	+		LRK54_RS11340	0.29	-0.4
2,513,902	+		LRK54_RS11340	0.29	-0.2
2,513,902	+		LRK54_RS11340	0.29	-1.0
2,513,902	+		LRK54_RS11340	0.29	+0.5
2,513,902	+		LRK54_RS11340	0.29	+0.2
2,513,902	+		LRK54_RS11340	0.29	-0.5
2,513,902	+		LRK54_RS11340	0.29	+0.1
2,513,903	-		LRK54_RS11340	0.29	+1.2
2,513,903	-		LRK54_RS11340	0.29	-0.6
2,513,903	-		LRK54_RS11340	0.29	-0.3
2,513,903	-		LRK54_RS11340	0.29	-0.3
2,513,903	-		LRK54_RS11340	0.29	-1.8
2,513,903	-		LRK54_RS11340	0.29	+0.5
2,513,903	-		LRK54_RS11340	0.29	-2.1
2,513,903	-		LRK54_RS11340	0.29	-1.5
2,513,903	-		LRK54_RS11340	0.29	-0.4
2,513,903	-		LRK54_RS11340	0.29	-1.6
2,513,903	-		LRK54_RS11340	0.29	+0.2
2,513,903	-		LRK54_RS11340	0.29	-0.5
2,513,903	-		LRK54_RS11340	0.29	+0.5
2,513,903	-		LRK54_RS11340	0.29	-0.6
2,513,903	-		LRK54_RS11340	0.29	-0.5
2,513,903	-		LRK54_RS11340	0.29	-0.4
2,513,903	-		LRK54_RS11340	0.29	-0.2
2,513,903	-		LRK54_RS11340	0.29	-0.8
2,513,903	-		LRK54_RS11340	0.29	+0.6
2,513,903	-		LRK54_RS11340	0.29	+0.1
2,513,903	-		LRK54_RS11340	0.29	+0.1
2,514,208	+		LRK54_RS11340	0.61	-1.8
2,514,208	+		LRK54_RS11340	0.61	-1.6
2,514,208	+		LRK54_RS11340	0.61	+0.7
2,514,208	+		LRK54_RS11340	0.61	+0.1
2,514,208	+		LRK54_RS11340	0.61	-1.6
2,514,208	+		LRK54_RS11340	0.61	+0.2
2,514,208	+		LRK54_RS11340	0.61	+0.8
2,514,208	+		LRK54_RS11340	0.61	+0.3
2,514,208	+		LRK54_RS11340	0.61	+0.5
2,514,208	+		LRK54_RS11340	0.61	-0.3
2,514,208	+		LRK54_RS11340	0.61	-0.1
2,514,208	+		LRK54_RS11340	0.61	-1.2
2,514,208	+		LRK54_RS11340	0.61	+0.8
2,514,208	+		LRK54_RS11340	0.61	+2.4
2,514,208	+		LRK54_RS11340	0.61	+0.1
2,514,208	+		LRK54_RS11340	0.61	-0.4
2,514,208	+		LRK54_RS11340	0.61	-1.0
2,514,208	+		LRK54_RS11340	0.61	+1.1
2,514,209	-		LRK54_RS11340	0.62	-0.4
2,514,209	-		LRK54_RS11340	0.62	-0.4
2,514,209	-		LRK54_RS11340	0.62	+0.4
2,514,209	-		LRK54_RS11340	0.62	-0.3
2,514,209	-		LRK54_RS11340	0.62	-1.2
2,514,209	-		LRK54_RS11340	0.62	-0.6
2,514,209	-		LRK54_RS11340	0.62	-1.2
2,514,209	-		LRK54_RS11340	0.62	-0.2
2,514,209	-		LRK54_RS11340	0.62	+1.1
2,514,209	-		LRK54_RS11340	0.62	+0.4
2,514,209	-		LRK54_RS11340	0.62	-0.6
2,514,209	-		LRK54_RS11340	0.62	+0.4
2,514,209	-		LRK54_RS11340	0.62	-0.0
2,514,209	-		LRK54_RS11340	0.62	+0.1
2,514,209	-		LRK54_RS11340	0.62	-0.6
2,514,463	+		LRK54_RS11340	0.88	-1.4
2,514,463	+		LRK54_RS11340	0.88	-0.6
2,514,464	+		LRK54_RS11340	0.89	+1.9
2,514,464	-		LRK54_RS11340	0.89	+0.1
2,514,464	-		LRK54_RS11340	0.89	+0.2
2,514,464	-		LRK54_RS11340	0.89	-0.1
2,514,719	+		LRK54_RS11345	0.16	-0.2
2,514,719	+		LRK54_RS11345	0.16	-0.1
2,514,719	+		LRK54_RS11345	0.16	-1.5
2,514,719	+		LRK54_RS11345	0.16	-0.4
2,514,719	+		LRK54_RS11345	0.16	+0.8
2,514,719	+		LRK54_RS11345	0.16	+0.2
2,514,720	-		LRK54_RS11345	0.16	-0.8
2,514,720	-		LRK54_RS11345	0.16	-0.1
2,514,738	+		LRK54_RS11345	0.18	+0.5
2,514,738	+		LRK54_RS11345	0.18	-0.6
2,514,738	+		LRK54_RS11345	0.18	+0.8
2,514,738	+		LRK54_RS11345	0.18	-0.1
2,514,738	+		LRK54_RS11345	0.18	-1.2
2,514,738	+		LRK54_RS11345	0.18	-0.4
2,514,738	+		LRK54_RS11345	0.18	-0.7
2,514,738	+		LRK54_RS11345	0.18	+0.1
2,514,738	+		LRK54_RS11345	0.18	-0.6
2,514,738	+		LRK54_RS11345	0.18	+0.5
2,514,738	+		LRK54_RS11345	0.18	-0.3
2,514,738	+		LRK54_RS11345	0.18	+0.3
2,514,738	+		LRK54_RS11345	0.18	-1.2
2,514,738	+		LRK54_RS11345	0.18	+2.4
2,514,738	+		LRK54_RS11345	0.18	-1.6
2,514,738	+		LRK54_RS11345	0.18	-0.7
2,514,738	+		LRK54_RS11345	0.18	+0.8
2,514,738	+		LRK54_RS11345	0.18	+0.8
2,514,738	+		LRK54_RS11345	0.18	-1.1
2,514,739	-		LRK54_RS11345	0.18	+0.2
2,514,739	-		LRK54_RS11345	0.18	-0.1
2,514,739	-		LRK54_RS11345	0.18	-1.2
2,514,739	-		LRK54_RS11345	0.18	+0.6
2,514,739	-		LRK54_RS11345	0.18	-0.5
2,514,739	-		LRK54_RS11345	0.18	-0.1
2,514,739	-		LRK54_RS11345	0.18	-0.9
2,514,739	-		LRK54_RS11345	0.18	-0.2
2,514,739	-		LRK54_RS11345	0.18	+0.2
2,514,739	-		LRK54_RS11345	0.18	-0.9
2,514,739	-		LRK54_RS11345	0.18	-1.4
2,514,739	-		LRK54_RS11345	0.18	-0.1
2,514,739	-		LRK54_RS11345	0.18	+0.4
2,514,739	-		LRK54_RS11345	0.18	+0.6
2,514,739	-		LRK54_RS11345	0.18	-0.9
2,514,739	-		LRK54_RS11345	0.18	+0.4
2,514,739	-		LRK54_RS11345	0.18	-1.0
2,514,739	-		LRK54_RS11345	0.18	+0.1
2,514,739	-		LRK54_RS11345	0.18	+0.1
2,514,739	-		LRK54_RS11345	0.18	-0.9
2,514,739	-		LRK54_RS11345	0.18	-2.8
2,514,739	-		LRK54_RS11345	0.18	+0.1
2,514,840	+		LRK54_RS11345	0.29	+0.7
2,514,859	-		LRK54_RS11345	0.31	+0.3
2,514,859	-		LRK54_RS11345	0.31	-0.6
2,514,859	-		LRK54_RS11345	0.31	-0.1
2,514,912	+		LRK54_RS11345	0.37	+0.1
2,514,912	+		LRK54_RS11345	0.37	-1.1
2,514,912	+		LRK54_RS11345	0.37	+0.4
2,514,912	+		LRK54_RS11345	0.37	-0.6
2,514,912	+		LRK54_RS11345	0.37	-0.3
2,514,912	+		LRK54_RS11345	0.37	-2.7
2,514,912	+		LRK54_RS11345	0.37	-0.4
2,514,912	+		LRK54_RS11345	0.37	-1.6
2,514,912	+		LRK54_RS11345	0.37	-0.6
2,514,912	+		LRK54_RS11345	0.37	+0.0
2,514,912	+		LRK54_RS11345	0.37	-0.6
2,514,912	+		LRK54_RS11345	0.37	+0.1
2,514,912	+		LRK54_RS11345	0.37	+0.8
2,514,913	-		LRK54_RS11345	0.37	-0.4
2,514,913	-		LRK54_RS11345	0.37	-0.4
2,514,913	-		LRK54_RS11345	0.37	-0.2
2,514,913	-		LRK54_RS11345	0.37	+0.2
2,514,913	-		LRK54_RS11345	0.37	+0.2
2,514,913	-		LRK54_RS11345	0.37	-0.6
2,514,913	-		LRK54_RS11345	0.37	-0.4
2,514,913	-		LRK54_RS11345	0.37	-1.3
2,514,913	-		LRK54_RS11345	0.37	-1.1
2,514,913	-		LRK54_RS11345	0.37	+0.2
2,514,969	+		LRK54_RS11345	0.43	+1.4
2,514,969	+		LRK54_RS11345	0.43	-0.4
2,514,969	+		LRK54_RS11345	0.43	-0.2
2,514,969	+		LRK54_RS11345	0.43	-0.3
2,514,969	+		LRK54_RS11345	0.43	+0.5
2,514,969	+		LRK54_RS11345	0.43	+1.5
2,514,970	-		LRK54_RS11345	0.44	+1.4
2,514,970	-		LRK54_RS11345	0.44	-1.5
2,514,970	-		LRK54_RS11345	0.44	-0.1
2,515,179	+		LRK54_RS11345	0.67	-0.8
2,515,179	+		LRK54_RS11345	0.67	+1.2
2,515,180	-		LRK54_RS11345	0.67	-0.0
2,515,180	-		LRK54_RS11345	0.67	+0.5
2,515,180	-		LRK54_RS11345	0.67	-0.4
2,515,180	-		LRK54_RS11345	0.67	-0.2
2,515,225	+		LRK54_RS11345	0.72	-0.8
2,515,225	+		LRK54_RS11345	0.72	-0.3
2,515,225	+		LRK54_RS11345	0.72	+0.4
2,515,225	+		LRK54_RS11345	0.72	-0.1
2,515,225	+		LRK54_RS11345	0.72	-1.4
2,515,225	+		LRK54_RS11345	0.72	-1.4
2,515,225	+		LRK54_RS11345	0.72	+1.6
2,515,225	+		LRK54_RS11345	0.72	+0.2
2,515,225	+		LRK54_RS11345	0.72	+1.6
2,515,225	+		LRK54_RS11345	0.72	+0.5
2,515,225	+		LRK54_RS11345	0.72	-0.4
2,515,225	+		LRK54_RS11345	0.72	+0.5
2,515,225	+		LRK54_RS11345	0.72	-0.1
2,515,225	+		LRK54_RS11345	0.72	-1.0
2,515,225	+		LRK54_RS11345	0.72	+0.8
2,515,226	-		LRK54_RS11345	0.72	-0.1
2,515,226	-		LRK54_RS11345	0.72	-1.6
2,515,226	-		LRK54_RS11345	0.72	-0.8
2,515,226	-		LRK54_RS11345	0.72	+0.6
2,515,226	-		LRK54_RS11345	0.72	-1.1
2,515,226	-		LRK54_RS11345	0.72	+0.2
2,515,226	-		LRK54_RS11345	0.72	-0.9
2,515,226	-		LRK54_RS11345	0.72	-0.0
2,515,226	-		LRK54_RS11345	0.72	+0.8
2,515,287	+		LRK54_RS11345	0.79	-0.2
2,515,287	+		LRK54_RS11345	0.79	-0.7
2,515,287	+		LRK54_RS11345	0.79	+0.2
2,515,287	+		LRK54_RS11345	0.79	-0.4
2,515,287	+		LRK54_RS11345	0.79	+0.8
2,515,287	+		LRK54_RS11345	0.79	-0.3
2,515,287	+		LRK54_RS11345	0.79	+0.2
2,515,287	+		LRK54_RS11345	0.79	+0.6
2,515,287	+		LRK54_RS11345	0.79	+0.4
2,515,288	-		LRK54_RS11345	0.79	-1.3
2,515,288	-		LRK54_RS11345	0.79	+0.1
2,515,288	-		LRK54_RS11345	0.79	-1.5
2,515,288	-		LRK54_RS11345	0.79	+0.0
2,515,288	-		LRK54_RS11345	0.79	+0.4
2,515,288	-		LRK54_RS11345	0.79	-0.5
2,515,288	-		LRK54_RS11345	0.79	+0.1
2,515,288	-		LRK54_RS11345	0.79	-0.8
2,515,288	-		LRK54_RS11345	0.79	-2.4
2,515,288	-		LRK54_RS11345	0.79	-0.1
2,515,288	-		LRK54_RS11345	0.79	+0.2
2,515,288	-		LRK54_RS11345	0.79	+0.1
2,515,495	+				-0.3
2,515,495	+				+0.8
2,515,496	-				-0.8
2,515,496	-				-1.3
2,515,747	+				+0.4
2,515,747	+				-1.2
2,515,747	+				+0.4
2,515,747	+				-0.4
2,515,747	+				+1.4
2,515,747	+				-0.4
2,515,747	+				+2.7
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