Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11155

Experiment: R2A pH6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A pH6
2,474,705	+		LRK54_RS11145	0.72	-0.5
2,474,705	+		LRK54_RS11145	0.72	+0.9
2,474,705	+		LRK54_RS11145	0.72	+0.2
2,474,705	+		LRK54_RS11145	0.72	+1.7
2,474,705	+		LRK54_RS11145	0.72	-0.6
2,474,705	+		LRK54_RS11145	0.72	-2.3
2,474,705	+		LRK54_RS11145	0.72	-0.5
2,474,705	+		LRK54_RS11145	0.72	+0.6
2,474,705	+		LRK54_RS11145	0.72	-0.8
2,474,705	+		LRK54_RS11145	0.72	+0.7
2,474,705	+		LRK54_RS11145	0.72	+1.2
2,474,705	+		LRK54_RS11145	0.72	-0.3
2,474,705	+		LRK54_RS11145	0.72	+0.9
2,474,705	+		LRK54_RS11145	0.72	+0.8
2,474,705	+		LRK54_RS11145	0.72	+1.1
2,474,705	+		LRK54_RS11145	0.72	-0.1
2,474,705	+		LRK54_RS11145	0.72	+1.0
2,474,705	+		LRK54_RS11145	0.72	+0.3
2,474,705	+		LRK54_RS11145	0.72	-0.2
2,474,705	+		LRK54_RS11145	0.72	-0.6
2,474,705	+		LRK54_RS11145	0.72	+1.4
2,474,705	+		LRK54_RS11145	0.72	-0.5
2,474,705	+		LRK54_RS11145	0.72	+0.8
2,474,705	+		LRK54_RS11145	0.72	+0.2
2,474,705	+		LRK54_RS11145	0.72	+0.4
2,474,705	+		LRK54_RS11145	0.72	-1.4
2,474,705	+		LRK54_RS11145	0.72	-0.8
2,474,705	+		LRK54_RS11145	0.72	-0.7
2,474,705	+		LRK54_RS11145	0.72	+0.3
2,474,705	+		LRK54_RS11145	0.72	-1.2
2,474,705	+		LRK54_RS11145	0.72	+1.0
2,474,705	+		LRK54_RS11145	0.72	-1.7
2,474,705	+		LRK54_RS11145	0.72	+0.1
2,474,705	+		LRK54_RS11145	0.72	-0.8
2,474,705	+		LRK54_RS11145	0.72	+0.3
2,474,705	+		LRK54_RS11145	0.72	-0.8
2,474,706	-		LRK54_RS11145	0.73	-0.5
2,474,706	-		LRK54_RS11145	0.73	+1.2
2,474,706	-		LRK54_RS11145	0.73	+0.9
2,474,706	-		LRK54_RS11145	0.73	-0.9
2,474,706	-		LRK54_RS11145	0.73	-0.3
2,474,706	-		LRK54_RS11145	0.73	-0.5
2,474,706	-		LRK54_RS11145	0.73	+0.2
2,474,706	-		LRK54_RS11145	0.73	-0.8
2,474,706	-		LRK54_RS11145	0.73	+0.5
2,474,706	-		LRK54_RS11145	0.73	+0.9
2,474,706	-		LRK54_RS11145	0.73	-0.4
2,474,706	-		LRK54_RS11145	0.73	-0.6
2,474,706	-		LRK54_RS11145	0.73	-0.8
2,474,706	-		LRK54_RS11145	0.73	+1.4
2,474,706	-		LRK54_RS11145	0.73	-0.3
2,474,706	-		LRK54_RS11145	0.73	-2.5
2,474,706	-		LRK54_RS11145	0.73	-0.1
2,474,706	-		LRK54_RS11145	0.73	-0.6
2,474,706	-		LRK54_RS11145	0.73	+0.2
2,474,706	-		LRK54_RS11145	0.73	+0.5
2,474,706	-		LRK54_RS11145	0.73	+3.2
2,474,706	-		LRK54_RS11145	0.73	+0.1
2,474,706	-		LRK54_RS11145	0.73	-0.2
2,474,706	-		LRK54_RS11145	0.73	+0.1
2,474,706	-		LRK54_RS11145	0.73	-0.3
2,474,706	-		LRK54_RS11145	0.73	-1.3
2,474,706	-		LRK54_RS11145	0.73	+1.0
2,474,706	-		LRK54_RS11145	0.73	-0.3
2,474,706	-		LRK54_RS11145	0.73	+0.0
2,474,706	-		LRK54_RS11145	0.73	-0.2
2,474,706	-		LRK54_RS11145	0.73	+0.1
2,474,706	-		LRK54_RS11145	0.73	-1.0
2,474,706	-		LRK54_RS11145	0.73	-0.2
2,474,706	-		LRK54_RS11145	0.73	+0.7
2,474,706	-		LRK54_RS11145	0.73	-0.9
2,474,706	-		LRK54_RS11145	0.73	-1.3
2,474,706	-		LRK54_RS11145	0.73	-0.1
2,474,706	-		LRK54_RS11145	0.73	-0.8
2,474,706	-		LRK54_RS11145	0.73	-0.3
2,474,706	-		LRK54_RS11145	0.73	+0.2
2,474,740	+		LRK54_RS11145	0.77	+0.6
2,474,740	+		LRK54_RS11145	0.77	+0.1
2,474,740	+		LRK54_RS11145	0.77	+0.9
2,474,740	+		LRK54_RS11145	0.77	+1.1
2,474,740	+		LRK54_RS11145	0.77	-0.4
2,474,740	+		LRK54_RS11145	0.77	+0.4
2,474,740	+		LRK54_RS11145	0.77	+0.1
2,474,740	+		LRK54_RS11145	0.77	+0.1
2,474,740	+		LRK54_RS11145	0.77	+0.6
2,474,740	+		LRK54_RS11145	0.77	-0.1
2,474,740	+		LRK54_RS11145	0.77	-0.4
2,474,740	+		LRK54_RS11145	0.77	+0.6
2,474,740	+		LRK54_RS11145	0.77	+1.9
2,474,740	+				-0.4
2,474,741	-		LRK54_RS11145	0.77	-0.5
2,474,741	-		LRK54_RS11145	0.77	-0.5
2,474,741	-		LRK54_RS11145	0.77	-2.2
2,474,741	-		LRK54_RS11145	0.77	+1.1
2,474,741	-		LRK54_RS11145	0.77	+1.4
2,474,741	-		LRK54_RS11145	0.77	+0.0
2,474,741	-		LRK54_RS11145	0.77	-0.3
2,474,741	-		LRK54_RS11145	0.77	+0.7
2,474,741	-		LRK54_RS11145	0.77	+1.4
2,474,741	-		LRK54_RS11145	0.77	-0.2
2,474,741	-		LRK54_RS11145	0.77	-0.6
2,474,741	-		LRK54_RS11145	0.77	+0.2
2,474,741	-		LRK54_RS11145	0.77	-1.6
2,474,741	-		LRK54_RS11145	0.77	-0.8
2,474,741	-		LRK54_RS11145	0.77	+0.2
2,474,741	-		LRK54_RS11145	0.77	+0.2
2,474,741	-		LRK54_RS11145	0.77	+0.2
2,474,741	-		LRK54_RS11145	0.77	+1.1
2,474,741	-		LRK54_RS11145	0.77	+0.6
2,474,741	-		LRK54_RS11145	0.77	-0.4
2,474,825	+		LRK54_RS11145	0.86	-0.9
2,474,825	+		LRK54_RS11145	0.86	+0.5
2,474,825	+		LRK54_RS11145	0.86	+1.4
2,474,825	+		LRK54_RS11145	0.86	-0.9
2,474,825	+		LRK54_RS11145	0.86	-1.2
2,474,825	+		LRK54_RS11145	0.86	+0.7
2,474,826	-		LRK54_RS11145	0.87	-0.2
2,474,826	-		LRK54_RS11145	0.87	-1.8
2,474,826	-		LRK54_RS11145	0.87	-0.2
2,474,826	-		LRK54_RS11145	0.87	-0.8
2,474,867	+				-0.0
2,474,867	+				-1.9
2,474,867	+				+0.5
2,474,867	+				-0.6
2,474,867	+				+0.4
2,474,867	+				-0.5
2,474,868	-				+0.7
2,474,868	-				-1.6
2,474,868	-				-0.2
2,474,868	-				-0.2
2,474,868	-				+0.1
2,474,868	-				-0.1
2,475,004	+				-2.1
2,475,004	+				-1.2
2,475,004	+				-0.1
2,475,004	+				-0.2
2,475,004	+				-0.5
2,475,005	-				-0.5
2,475,005	-				-0.5
2,475,005	-				-0.4
2,475,005	-				+0.2
2,475,029	+				-0.5
2,475,029	+				-1.3
2,475,029	+				-0.3
2,475,030	-				-0.1
2,475,030	-				+0.2
2,475,030	-				+1.0
2,475,030	-				+0.4
2,475,083	+				-0.1
2,475,083	+				-0.1
2,475,083	+				-0.4
2,475,083	+				-1.3
2,475,083	+				+0.1
2,475,083	+				-0.6
2,475,084	-				+0.8
2,475,084	-				-0.1
2,475,084	-				-0.7
2,475,084	-				-0.2
2,475,206	+		LRK54_RS11150	0.30	+0.4
2,475,206	+		LRK54_RS11150	0.30	-1.5
2,475,206	+		LRK54_RS11150	0.30	-1.2
2,475,206	+		LRK54_RS11150	0.30	+0.7
2,475,206	+		LRK54_RS11150	0.30	-1.0
2,475,206	+		LRK54_RS11150	0.30	-0.0
2,475,206	+		LRK54_RS11150	0.30	-0.5
2,475,206	+		LRK54_RS11150	0.30	-0.5
2,475,206	+		LRK54_RS11150	0.30	-0.7
2,475,206	+		LRK54_RS11150	0.30	-0.0
2,475,206	+		LRK54_RS11150	0.30	-0.9
2,475,206	+		LRK54_RS11150	0.30	-0.7
2,475,206	+		LRK54_RS11150	0.30	+0.1
2,475,206	+		LRK54_RS11150	0.30	+0.8
2,475,207	-		LRK54_RS11150	0.30	-0.7
2,475,207	-		LRK54_RS11150	0.30	+0.1
2,475,207	-				+1.4
2,475,207	-		LRK54_RS11150	0.30	+0.2
2,475,207	-		LRK54_RS11150	0.30	+1.4
2,475,207	-		LRK54_RS11150	0.30	-0.2
2,475,207	-		LRK54_RS11150	0.30	-0.2
2,475,207	-		LRK54_RS11150	0.30	+2.4
2,475,207	-		LRK54_RS11150	0.30	-0.3
2,475,207	-		LRK54_RS11150	0.30	+0.6
2,475,207	-		LRK54_RS11150	0.30	+0.2
2,475,207	-		LRK54_RS11150	0.30	-0.9
2,475,207	-		LRK54_RS11150	0.30	-0.7
2,475,207	-		LRK54_RS11150	0.30	-0.5
2,475,365	+		LRK54_RS11150	0.56	-0.2
2,475,365	+		LRK54_RS11150	0.56	-0.2
2,475,366	-		LRK54_RS11150	0.56	-1.6
2,475,366	-		LRK54_RS11150	0.56	+1.4
2,475,389	+		LRK54_RS11150	0.60	-0.3
2,475,389	+		LRK54_RS11150	0.60	+0.3
2,475,428	+		LRK54_RS11150	0.67	-0.6
2,475,428	+		LRK54_RS11150	0.67	+0.4
2,475,428	+		LRK54_RS11150	0.67	+0.2
2,475,429	-		LRK54_RS11150	0.67	+0.2
2,475,429	-		LRK54_RS11150	0.67	-0.6
2,475,429	-		LRK54_RS11150	0.67	-0.6
2,475,596	+				+0.1
2,475,596	+				-2.4
2,475,596	+				+1.6
2,475,596	+				+0.1
2,475,596	+				-1.5
2,475,596	+				+0.2
2,475,596	+				+1.0
2,475,596	+				+0.1
2,475,596	+				+0.7
2,475,596	+				-0.6
2,475,596	+				-0.1
2,475,596	+				+1.4
2,475,596	+				+0.3
2,475,596	+				-0.0
2,475,596	+				-1.8
2,475,596	+				+2.0
2,475,596	+				-0.8
2,475,596	+				-0.6
2,475,596	+				+0.1
2,475,596	+				-0.0
2,475,596	+				-0.2
2,475,596	+				-1.5
2,475,596	+				+1.0
2,475,596	+				+0.4
2,475,596	+				+1.4
2,475,596	+				+0.6
2,475,596	+				-0.0
2,475,596	+				+0.9
2,475,596	+				+0.2
2,475,596	+				-0.6
2,475,597	-				-0.2
2,475,597	-				-0.1
2,475,597	-				+0.3
2,475,597	-				-0.4
2,475,597	-				+1.6
2,475,597	-				+0.0
2,475,597	-				+0.8
2,475,597	-				+1.4
2,475,597	-				+0.0
2,475,597	-				-0.8
2,475,597	-				+0.2
2,475,597	-				+1.7
2,475,597	-				-0.3
2,475,597	-				+1.3
2,475,597	-				+1.2
2,475,597	-				-0.8
2,475,597	-				-1.4
2,475,597	-				+2.0
2,475,597	-				-1.1
2,475,597	-				-0.0
2,475,597	-				+0.0
2,475,597	-				-0.5
2,475,597	-				-0.6
2,475,597	-				+0.7
2,475,597	-				-1.3
2,475,597	-				-0.4
2,475,597	-				+0.7
2,475,882	+		LRK54_RS11155	0.20	-1.0
2,475,882	+		LRK54_RS11155	0.20	+1.7
2,475,882	+		LRK54_RS11155	0.20	+0.1
2,475,882	+		LRK54_RS11155	0.20	+0.1
2,475,882	+		LRK54_RS11155	0.20	+3.0
2,475,882	+		LRK54_RS11155	0.20	+1.7
2,475,882	+		LRK54_RS11155	0.20	-1.5
2,475,883	-		LRK54_RS11155	0.20	-0.7
2,475,883	-		LRK54_RS11155	0.20	-2.5
2,475,883	-		LRK54_RS11155	0.20	-0.6
2,475,883	-		LRK54_RS11155	0.20	-0.6
2,475,883	-		LRK54_RS11155	0.20	+0.1
2,475,883	-		LRK54_RS11155	0.20	-0.5
2,475,883	-		LRK54_RS11155	0.20	-0.8
2,475,883	-		LRK54_RS11155	0.20	+0.2
2,475,883	-		LRK54_RS11155	0.20	+0.1
2,475,883	-		LRK54_RS11155	0.20	-1.3
2,475,883	-		LRK54_RS11155	0.20	+0.8
2,475,915	+		LRK54_RS11155	0.23	-1.3
2,475,915	+		LRK54_RS11155	0.23	-3.1
2,475,915	+		LRK54_RS11155	0.23	+0.1
2,475,915	+		LRK54_RS11155	0.23	-0.2
2,475,915	+		LRK54_RS11155	0.23	+0.1
2,475,915	+		LRK54_RS11155	0.23	-0.2
2,475,915	+		LRK54_RS11155	0.23	+1.3
2,475,915	+		LRK54_RS11155	0.23	-1.6
2,475,916	-		LRK54_RS11155	0.23	-2.3
2,475,916	-		LRK54_RS11155	0.23	+0.1
2,475,916	-		LRK54_RS11155	0.23	-0.0
2,475,916	-		LRK54_RS11155	0.23	-0.3
2,475,916	-		LRK54_RS11155	0.23	+0.8
2,475,916	-		LRK54_RS11155	0.23	-1.0
2,475,916	-		LRK54_RS11155	0.23	+0.8
2,475,916	-		LRK54_RS11155	0.23	-0.3
2,476,089	+		LRK54_RS11155	0.37	-0.4
2,476,090	-		LRK54_RS11155	0.37	-0.6
2,476,090	-		LRK54_RS11155	0.37	-1.3
2,476,223	+		LRK54_RS11155	0.47	+0.4
2,476,223	+		LRK54_RS11155	0.47	-1.8
2,476,223	+		LRK54_RS11155	0.47	-1.2
2,476,224	-		LRK54_RS11155	0.47	-2.5
2,476,224	-		LRK54_RS11155	0.47	-1.0
2,476,224	-		LRK54_RS11155	0.47	-0.9
2,476,236	+		LRK54_RS11155	0.48	+1.1
2,476,236	+		LRK54_RS11155	0.48	+0.4
2,476,236	+		LRK54_RS11155	0.48	-0.6
2,476,237	-		LRK54_RS11155	0.48	-1.1
2,476,237	-		LRK54_RS11155	0.48	-1.6
2,476,237	-		LRK54_RS11155	0.48	+0.1
2,476,237	-		LRK54_RS11155	0.48	-1.8
2,476,251	+		LRK54_RS11155	0.50	-0.3
2,476,251	+		LRK54_RS11155	0.50	+0.5
2,476,251	+		LRK54_RS11155	0.50	-1.5
2,476,251	+		LRK54_RS11155	0.50	+0.8
2,476,251	+		LRK54_RS11155	0.50	-2.1
2,476,251	+		LRK54_RS11155	0.50	-1.2
2,476,251	+		LRK54_RS11155	0.50	-0.8
2,476,251	+		LRK54_RS11155	0.50	-2.5
2,476,251	+		LRK54_RS11155	0.50	-0.6
2,476,251	+		LRK54_RS11155	0.50	+0.3
2,476,251	+		LRK54_RS11155	0.50	-1.8
2,476,251	+		LRK54_RS11155	0.50	-1.3
2,476,252	-		LRK54_RS11155	0.50	+0.3
2,476,252	-		LRK54_RS11155	0.50	-1.7
2,476,252	-		LRK54_RS11155	0.50	+0.1
2,476,252	-		LRK54_RS11155	0.50	+0.7
2,476,252	-		LRK54_RS11155	0.50	+0.4
2,476,252	-		LRK54_RS11155	0.50	+0.3
2,476,252	-		LRK54_RS11155	0.50	-1.8
2,476,252	-		LRK54_RS11155	0.50	+0.9
2,476,252	-		LRK54_RS11155	0.50	+0.1
2,476,252	-		LRK54_RS11155	0.50	+0.5
2,476,252	-				+0.6
2,476,252	-		LRK54_RS11155	0.50	-0.6
2,476,252	-		LRK54_RS11155	0.50	-1.0
2,476,252	-		LRK54_RS11155	0.50	-0.6
2,476,252	-		LRK54_RS11155	0.50	-0.9
2,476,252	-		LRK54_RS11155	0.50	-0.7
2,476,252	-		LRK54_RS11155	0.50	+0.1
2,476,252	-		LRK54_RS11155	0.50	-1.7
2,476,252	-		LRK54_RS11155	0.50	-1.7
2,476,326	+		LRK54_RS11155	0.56	-1.8
2,476,326	+		LRK54_RS11155	0.56	+0.9
2,476,443	+		LRK54_RS11155	0.65	-0.7
2,476,443	+		LRK54_RS11155	0.65	-2.0
2,476,443	+		LRK54_RS11155	0.65	-2.4
2,476,443	+		LRK54_RS11155	0.65	+1.3
2,476,443	+		LRK54_RS11155	0.65	+2.1
2,476,443	+		LRK54_RS11155	0.65	-1.7
2,476,443	+		LRK54_RS11155	0.65	-1.5
2,476,443	+		LRK54_RS11155	0.65	-1.0
2,476,444	-		LRK54_RS11155	0.65	-0.2
2,476,444	-		LRK54_RS11155	0.65	-1.3
2,476,444	-		LRK54_RS11155	0.65	-0.2
2,476,444	-		LRK54_RS11155	0.65	-0.4
2,476,444	-		LRK54_RS11155	0.65	-2.8
2,476,444	-		LRK54_RS11155	0.65	-1.7
2,476,444	-		LRK54_RS11155	0.65	-0.2
2,476,444	-		LRK54_RS11155	0.65	-1.5
2,476,444	-		LRK54_RS11155	0.65	-0.8
2,476,444	-		LRK54_RS11155	0.65	-2.5
2,476,446	+		LRK54_RS11155	0.65	+0.4
2,476,446	+		LRK54_RS11155	0.65	+0.0
2,476,446	+		LRK54_RS11155	0.65	-0.7
2,476,446	+		LRK54_RS11155	0.65	-2.4
2,476,446	+		LRK54_RS11155	0.65	-0.2
2,476,446	+		LRK54_RS11155	0.65	-1.7
2,476,446	+		LRK54_RS11155	0.65	-1.6
2,476,446	+		LRK54_RS11155	0.65	-0.2
2,476,446	+		LRK54_RS11155	0.65	+1.4
2,476,446	+		LRK54_RS11155	0.65	-1.2
2,476,446	+		LRK54_RS11155	0.65	-1.0
2,476,446	+		LRK54_RS11155	0.65	-2.5
2,476,446	+		LRK54_RS11155	0.65	-0.9
2,476,446	+		LRK54_RS11155	0.65	-1.1
2,476,446	+		LRK54_RS11155	0.65	-0.5
2,476,447	-		LRK54_RS11155	0.65	-2.3
2,476,447	-		LRK54_RS11155	0.65	-1.7
2,476,447	-		LRK54_RS11155	0.65	-1.6
2,476,447	-		LRK54_RS11155	0.65	+0.1
2,476,447	-		LRK54_RS11155	0.65	-1.7
2,476,447	-		LRK54_RS11155	0.65	-0.1
2,476,447	-		LRK54_RS11155	0.65	-1.7
2,476,447	-		LRK54_RS11155	0.65	-0.5
2,476,447	-		LRK54_RS11155	0.65	+0.4
2,476,447	-		LRK54_RS11155	0.65	-0.9
2,476,447	-		LRK54_RS11155	0.65	+0.0
2,476,447	-		LRK54_RS11155	0.65	-0.4
2,476,447	-		LRK54_RS11155	0.65	-1.7
2,476,447	-		LRK54_RS11155	0.65	-1.3
2,476,447	-		LRK54_RS11155	0.65	-0.9
2,476,447	-		LRK54_RS11155	0.65	-1.4
2,476,447	-		LRK54_RS11155	0.65	-0.0
2,476,508	+		LRK54_RS11155	0.70	+0.3
2,476,509	-		LRK54_RS11155	0.70	-0.6
2,476,509	-		LRK54_RS11155	0.70	-0.2
2,476,509	-		LRK54_RS11155	0.70	-0.9
2,476,677	+		LRK54_RS11155	0.84	-1.0
2,476,677	+		LRK54_RS11155	0.84	-2.0
2,476,678	-		LRK54_RS11155	0.84	-0.9
2,476,678	-		LRK54_RS11155	0.84	+0.2
2,476,678	-		LRK54_RS11155	0.84	-0.6
2,476,743	+		LRK54_RS11155	0.89	-2.2
2,476,837	-				-1.1
2,476,935	+				+0.4
2,476,935	+				-1.8
2,476,935	+				+0.3
2,476,935	+				-0.1
2,476,935	+				+0.2
2,476,935	+				+0.6
2,476,935	+				-1.1
2,476,936	-				+0.8
2,476,936	-				-0.2
2,476,936	-				-0.4
2,476,936	-				+0.7
2,476,936	-				+1.0
2,476,936	-				+0.1
2,476,936	-				-0.5
2,476,936	-				-0.8
2,476,936	-				-1.1
2,476,936	-				-0.4
2,476,936	-				-0.4
2,476,936	-				-1.4
2,477,014	+				-0.3
2,477,014	+				+0.1
2,477,014	+				+0.0
2,477,014	+				-0.6
2,477,014	+				-0.1
2,477,014	+				-0.3
2,477,014	+				-0.1
2,477,014	+				-0.3
2,477,015	-				-0.9
2,477,015	-				-1.7
2,477,015	-				+0.6
2,477,015	-				-1.2