Experiment: Uranyl Acetate Dihydrate 200 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_20885 and IAI47_20890 are separated by 766 nucleotides IAI47_20890 and IAI47_20895 are separated by 619 nucleotides
IAI47_20885: IAI47_20885 - diguanylate cyclase, at 420,971 to 422,218
_20885
IAI47_20890: IAI47_20890 - hypothetical protein, at 422,985 to 423,758
_20890
IAI47_20895: IAI47_20895 - LacI family DNA-binding transcriptional regulator, at 424,378 to 425,448
_20895
Position (kb) 422
423
424 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 421.996 kb on + strand, within IAI47_20885 at 421.996 kb on + strand, within IAI47_20885 at 421.997 kb on - strand, within IAI47_20885 at 421.997 kb on - strand, within IAI47_20885 at 421.997 kb on - strand, within IAI47_20885 at 421.997 kb on - strand, within IAI47_20885 at 422.162 kb on - strand at 422.176 kb on + strand at 422.177 kb on - strand at 422.191 kb on + strand at 422.210 kb on + strand at 422.210 kb on + strand at 422.210 kb on + strand at 422.211 kb on - strand at 422.211 kb on - strand at 422.211 kb on - strand at 422.211 kb on - strand at 422.211 kb on - strand at 422.211 kb on - strand at 422.246 kb on + strand at 422.246 kb on + strand at 422.246 kb on + strand at 422.247 kb on - strand at 422.249 kb on + strand at 422.249 kb on + strand at 422.249 kb on + strand at 422.249 kb on + strand at 422.249 kb on + strand at 422.250 kb on - strand at 422.250 kb on - strand at 422.250 kb on - strand at 422.250 kb on - strand at 422.250 kb on - strand at 422.262 kb on + strand at 422.262 kb on + strand at 422.263 kb on - strand at 422.272 kb on + strand at 422.284 kb on + strand at 422.284 kb on + strand at 422.285 kb on - strand at 422.285 kb on - strand at 422.285 kb on - strand at 422.286 kb on + strand at 422.287 kb on - strand at 422.292 kb on + strand at 422.292 kb on + strand at 422.292 kb on + strand at 422.292 kb on + strand at 422.292 kb on + strand at 422.292 kb on + strand at 422.293 kb on - strand at 422.293 kb on - strand at 422.293 kb on - strand at 422.293 kb on - strand at 422.310 kb on + strand at 422.333 kb on + strand at 422.334 kb on - strand at 422.334 kb on - strand at 422.334 kb on - strand at 422.334 kb on - strand at 422.356 kb on + strand at 422.357 kb on - strand at 422.413 kb on + strand at 422.414 kb on - strand at 422.414 kb on - strand at 422.441 kb on + strand at 422.442 kb on - strand at 422.442 kb on - strand at 422.442 kb on - strand at 422.442 kb on - strand at 422.457 kb on + strand at 422.457 kb on + strand at 422.457 kb on + strand at 422.457 kb on + strand at 422.458 kb on - strand at 422.458 kb on - strand at 422.458 kb on - strand at 422.469 kb on + strand at 422.470 kb on - strand at 422.470 kb on - strand at 422.470 kb on - strand at 422.470 kb on - strand at 422.471 kb on + strand at 422.472 kb on - strand at 422.497 kb on - strand at 422.511 kb on + strand at 422.511 kb on + strand at 422.511 kb on + strand at 422.511 kb on + strand at 422.512 kb on - strand at 422.512 kb on - strand at 422.512 kb on - strand at 422.512 kb on - strand at 422.512 kb on - strand at 422.512 kb on - strand at 422.512 kb on - strand at 422.512 kb on - strand at 422.512 kb on - strand at 422.512 kb on - strand at 422.513 kb on + strand at 422.513 kb on + strand at 422.513 kb on + strand at 422.513 kb on + strand at 422.513 kb on + strand at 422.514 kb on - strand at 422.514 kb on - strand at 422.514 kb on - strand at 422.514 kb on - strand at 422.544 kb on - strand at 422.588 kb on - strand at 422.588 kb on - strand at 422.598 kb on - strand at 422.598 kb on - strand at 422.598 kb on - strand at 422.687 kb on + strand at 422.694 kb on + strand at 422.694 kb on + strand at 422.694 kb on + strand at 422.695 kb on - strand at 422.696 kb on + strand at 422.696 kb on + strand at 422.696 kb on + strand at 422.696 kb on + strand at 422.696 kb on + strand at 422.696 kb on + strand at 422.697 kb on - strand at 422.697 kb on - strand at 422.697 kb on - strand at 422.796 kb on + strand at 422.796 kb on + strand at 422.796 kb on + strand at 422.796 kb on + strand at 422.796 kb on + strand at 422.796 kb on + strand at 422.796 kb on + strand at 422.797 kb on - strand at 422.797 kb on - strand at 422.926 kb on + strand at 422.927 kb on - strand at 422.934 kb on + strand at 422.949 kb on - strand at 422.949 kb on - strand at 422.952 kb on - strand at 422.993 kb on + strand at 423.017 kb on - strand at 423.123 kb on + strand, within IAI47_20890 at 423.143 kb on - strand, within IAI47_20890 at 423.143 kb on - strand, within IAI47_20890 at 423.143 kb on - strand, within IAI47_20890 at 423.183 kb on - strand, within IAI47_20890 at 423.183 kb on - strand, within IAI47_20890 at 423.200 kb on + strand, within IAI47_20890 at 423.200 kb on + strand, within IAI47_20890 at 423.200 kb on + strand, within IAI47_20890 at 423.201 kb on - strand, within IAI47_20890 at 423.211 kb on - strand, within IAI47_20890 at 423.211 kb on - strand, within IAI47_20890 at 423.252 kb on - strand, within IAI47_20890 at 423.278 kb on + strand, within IAI47_20890 at 423.278 kb on + strand, within IAI47_20890 at 423.279 kb on - strand, within IAI47_20890 at 423.307 kb on + strand, within IAI47_20890 at 423.308 kb on - strand, within IAI47_20890 at 423.319 kb on + strand, within IAI47_20890 at 423.319 kb on + strand, within IAI47_20890 at 423.319 kb on + strand, within IAI47_20890 at 423.319 kb on + strand, within IAI47_20890 at 423.320 kb on - strand, within IAI47_20890 at 423.320 kb on - strand, within IAI47_20890 at 423.370 kb on + strand, within IAI47_20890 at 423.370 kb on + strand, within IAI47_20890 at 423.371 kb on - strand, within IAI47_20890 at 423.371 kb on - strand, within IAI47_20890 at 423.371 kb on - strand, within IAI47_20890 at 423.419 kb on + strand, within IAI47_20890 at 423.419 kb on + strand, within IAI47_20890 at 423.419 kb on + strand, within IAI47_20890 at 423.419 kb on + strand, within IAI47_20890 at 423.419 kb on + strand, within IAI47_20890 at 423.420 kb on - strand, within IAI47_20890 at 423.420 kb on - strand, within IAI47_20890 at 423.420 kb on - strand, within IAI47_20890 at 423.422 kb on - strand, within IAI47_20890 at 423.521 kb on + strand, within IAI47_20890 at 423.521 kb on + strand, within IAI47_20890 at 423.522 kb on - strand, within IAI47_20890 at 423.522 kb on - strand, within IAI47_20890 at 423.524 kb on + strand, within IAI47_20890 at 423.524 kb on + strand, within IAI47_20890 at 423.525 kb on - strand, within IAI47_20890 at 423.525 kb on - strand, within IAI47_20890 at 423.545 kb on + strand, within IAI47_20890 at 423.585 kb on - strand, within IAI47_20890 at 423.585 kb on - strand, within IAI47_20890 at 423.601 kb on + strand, within IAI47_20890 at 423.601 kb on + strand, within IAI47_20890 at 423.601 kb on + strand, within IAI47_20890 at 423.601 kb on + strand, within IAI47_20890 at 423.698 kb on + strand at 423.698 kb on + strand at 423.699 kb on - strand at 423.699 kb on - strand at 423.699 kb on - strand at 423.707 kb on + strand at 423.707 kb on + strand at 423.708 kb on - strand at 423.708 kb on - strand at 423.708 kb on - strand at 423.708 kb on - strand at 423.708 kb on - strand at 423.715 kb on + strand at 423.716 kb on - strand at 423.716 kb on - strand at 423.772 kb on + strand at 423.773 kb on - strand at 423.778 kb on + strand at 423.778 kb on + strand at 423.779 kb on - strand at 423.793 kb on + strand at 423.793 kb on + strand at 423.793 kb on + strand at 423.793 kb on + strand at 423.830 kb on + strand at 423.832 kb on + strand at 423.833 kb on - strand at 423.833 kb on - strand at 423.890 kb on + strand at 423.890 kb on + strand at 423.890 kb on + strand at 423.890 kb on + strand at 423.891 kb on - strand at 423.891 kb on - strand at 423.891 kb on - strand at 423.891 kb on - strand at 423.891 kb on - strand at 423.891 kb on - strand at 423.891 kb on - strand at 423.893 kb on + strand at 423.893 kb on + strand at 423.893 kb on + strand at 423.893 kb on + strand at 423.893 kb on + strand at 423.893 kb on + strand at 423.893 kb on + strand at 423.893 kb on + strand at 423.893 kb on + strand at 423.894 kb on - strand at 423.894 kb on - strand at 423.894 kb on - strand at 423.894 kb on - strand at 423.894 kb on - strand at 423.894 kb on - strand at 423.969 kb on - strand at 424.005 kb on - strand at 424.005 kb on - strand at 424.017 kb on + strand at 424.017 kb on + strand at 424.017 kb on + strand at 424.045 kb on + strand at 424.045 kb on + strand at 424.045 kb on + strand at 424.046 kb on - strand at 424.046 kb on - strand at 424.046 kb on - strand at 424.046 kb on - strand at 424.048 kb on + strand at 424.048 kb on + strand at 424.048 kb on + strand at 424.048 kb on + strand at 424.048 kb on + strand at 424.048 kb on + strand at 424.048 kb on + strand at 424.049 kb on - strand at 424.049 kb on - strand at 424.049 kb on - strand at 424.049 kb on - strand at 424.049 kb on - strand at 424.049 kb on - strand at 424.049 kb on - strand at 424.049 kb on - strand at 424.049 kb on - strand at 424.073 kb on + strand at 424.073 kb on + strand at 424.149 kb on + strand at 424.149 kb on + strand at 424.168 kb on + strand at 424.168 kb on + strand at 424.169 kb on - strand at 424.169 kb on - strand at 424.193 kb on + strand at 424.193 kb on + strand at 424.193 kb on + strand at 424.193 kb on + strand at 424.193 kb on + strand at 424.193 kb on + strand at 424.193 kb on + strand at 424.194 kb on - strand at 424.194 kb on - strand at 424.194 kb on - strand at 424.283 kb on - strand at 424.311 kb on + strand at 424.312 kb on - strand at 424.312 kb on - strand at 424.315 kb on + strand at 424.331 kb on + strand at 424.331 kb on + strand at 424.331 kb on + strand at 424.332 kb on - strand at 424.358 kb on + strand at 424.359 kb on - strand at 424.526 kb on - strand, within IAI47_20895 at 424.552 kb on - strand, within IAI47_20895 at 424.613 kb on + strand, within IAI47_20895 at 424.613 kb on + strand, within IAI47_20895 at 424.613 kb on + strand, within IAI47_20895 at 424.613 kb on + strand, within IAI47_20895 at 424.613 kb on + strand, within IAI47_20895 at 424.613 kb on + strand, within IAI47_20895 at 424.613 kb on + strand, within IAI47_20895 at 424.613 kb on + strand, within IAI47_20895 at 424.614 kb on - strand, within IAI47_20895 at 424.614 kb on - strand, within IAI47_20895 at 424.614 kb on - strand, within IAI47_20895 at 424.614 kb on - strand, within IAI47_20895 at 424.756 kb on + strand, within IAI47_20895 at 424.756 kb on + strand, within IAI47_20895 at 424.756 kb on + strand, within IAI47_20895 at 424.757 kb on - strand, within IAI47_20895 at 424.757 kb on - strand, within IAI47_20895
Per-strain Table
Position Strand Gene LocusTag Fraction Uranyl Acetate Dihydrate 200 uM, aerobic remove 421,996 + IAI47_20885 0.82 +0.1 421,996 + IAI47_20885 0.82 +0.9 421,997 - IAI47_20885 0.82 -0.6 421,997 - IAI47_20885 0.82 +1.3 421,997 - IAI47_20885 0.82 +0.6 421,997 - IAI47_20885 0.82 -1.8 422,162 - +1.4 422,176 + -1.6 422,177 - -1.1 422,191 + +2.6 422,210 + -0.8 422,210 + +2.5 422,210 + -1.3 422,211 - +1.0 422,211 - -2.0 422,211 - -2.4 422,211 - -0.3 422,211 - +0.3 422,211 - +0.9 422,246 + +0.4 422,246 + -0.0 422,246 + +1.3 422,247 - -1.2 422,249 + +3.0 422,249 + +0.4 422,249 + -0.7 422,249 + +1.1 422,249 + -0.8 422,250 - +0.8 422,250 - +2.8 422,250 - -3.1 422,250 - -0.6 422,250 - -1.2 422,262 + -0.2 422,262 + +0.3 422,263 - -1.4 422,272 + -0.2 422,284 + -2.0 422,284 + +0.7 422,285 - +0.8 422,285 - +2.9 422,285 - -0.4 422,286 + -1.6 422,287 - -0.9 422,292 + -0.8 422,292 + +2.4 422,292 + +0.6 422,292 + -1.2 422,292 + -2.3 422,292 + -0.2 422,293 - +0.9 422,293 - -0.9 422,293 - +1.8 422,293 - -2.2 422,310 + +1.0 422,333 + +1.5 422,334 - +0.1 422,334 - -0.3 422,334 - +0.0 422,334 - +1.3 422,356 + -0.2 422,357 - -2.1 422,413 + +0.7 422,414 - +0.9 422,414 - +0.2 422,441 + -2.8 422,442 - +1.4 422,442 - -1.4 422,442 - -1.4 422,442 - +2.1 422,457 + -1.3 422,457 + +0.5 422,457 + -0.1 422,457 + +0.2 422,458 - -1.1 422,458 - -0.1 422,458 - +0.8 422,469 + -2.3 422,470 - -2.8 422,470 - -2.8 422,470 - -2.4 422,470 - +0.3 422,471 + -1.3 422,472 - -1.2 422,497 - +0.4 422,511 + +0.8 422,511 + -0.7 422,511 + -1.2 422,511 + +0.4 422,512 - +0.5 422,512 - -0.5 422,512 - -2.1 422,512 - -0.7 422,512 - -0.9 422,512 - +0.5 422,512 - +1.4 422,512 - -0.7 422,512 - +0.2 422,512 - +1.1 422,513 + -0.0 422,513 + +0.9 422,513 + -2.3 422,513 + -1.9 422,513 + +2.4 422,514 - +3.0 422,514 - -1.0 422,514 - -2.1 422,514 - +1.4 422,544 - +2.4 422,588 - +1.2 422,588 - +1.6 422,598 - +0.9 422,598 - +1.3 422,598 - +0.2 422,687 + -1.1 422,694 + +0.5 422,694 + +0.1 422,694 + -0.0 422,695 - -0.5 422,696 + +2.1 422,696 + -0.0 422,696 + +0.5 422,696 + +1.7 422,696 + -0.3 422,696 + +0.8 422,697 - -0.8 422,697 - +0.3 422,697 - +0.7 422,796 + -2.5 422,796 + -1.1 422,796 + -2.2 422,796 + -1.3 422,796 + -1.3 422,796 + +0.1 422,796 + -0.3 422,797 - +0.4 422,797 - -0.9 422,926 + +0.8 422,927 - +1.7 422,934 + +1.4 422,949 - -1.0 422,949 - +0.9 422,952 - +0.8 422,993 + +0.7 423,017 - +0.5 423,123 + IAI47_20890 0.18 +1.6 423,143 - IAI47_20890 0.20 +0.2 423,143 - IAI47_20890 0.20 -0.9 423,143 - IAI47_20890 0.20 -0.4 423,183 - IAI47_20890 0.26 +1.5 423,183 - IAI47_20890 0.26 -0.3 423,200 + IAI47_20890 0.28 -1.3 423,200 + IAI47_20890 0.28 +1.8 423,200 + IAI47_20890 0.28 -1.6 423,201 - IAI47_20890 0.28 +0.9 423,211 - IAI47_20890 0.29 +0.8 423,211 - IAI47_20890 0.29 -0.7 423,252 - IAI47_20890 0.34 +1.2 423,278 + IAI47_20890 0.38 -0.9 423,278 + IAI47_20890 0.38 +1.1 423,279 - IAI47_20890 0.38 -1.4 423,307 + IAI47_20890 0.42 +0.8 423,308 - IAI47_20890 0.42 +0.6 423,319 + IAI47_20890 0.43 -0.2 423,319 + IAI47_20890 0.43 +1.4 423,319 + IAI47_20890 0.43 -2.7 423,319 + IAI47_20890 0.43 -0.3 423,320 - IAI47_20890 0.43 +1.2 423,320 - IAI47_20890 0.43 +0.7 423,370 + IAI47_20890 0.50 -0.8 423,370 + IAI47_20890 0.50 -0.4 423,371 - IAI47_20890 0.50 -1.1 423,371 - IAI47_20890 0.50 +0.2 423,371 - IAI47_20890 0.50 +1.2 423,419 + IAI47_20890 0.56 +1.0 423,419 + IAI47_20890 0.56 +1.4 423,419 + IAI47_20890 0.56 +1.4 423,419 + IAI47_20890 0.56 -0.9 423,419 + IAI47_20890 0.56 +1.2 423,420 - IAI47_20890 0.56 -0.5 423,420 - IAI47_20890 0.56 +0.2 423,420 - IAI47_20890 0.56 +0.3 423,422 - IAI47_20890 0.56 -2.2 423,521 + IAI47_20890 0.69 -1.1 423,521 + IAI47_20890 0.69 +0.6 423,522 - IAI47_20890 0.69 +0.8 423,522 - IAI47_20890 0.69 +1.2 423,524 + IAI47_20890 0.70 +0.2 423,524 + IAI47_20890 0.70 +0.2 423,525 - IAI47_20890 0.70 +0.5 423,525 - IAI47_20890 0.70 +1.2 423,545 + IAI47_20890 0.72 -2.6 423,585 - IAI47_20890 0.78 +0.1 423,585 - IAI47_20890 0.78 +1.8 423,601 + IAI47_20890 0.80 +1.8 423,601 + IAI47_20890 0.80 +1.7 423,601 + IAI47_20890 0.80 +0.6 423,601 + IAI47_20890 0.80 -0.2 423,698 + +1.4 423,698 + +1.2 423,699 - -2.2 423,699 - +0.0 423,699 - +0.2 423,707 + +1.6 423,707 + -0.3 423,708 - +0.0 423,708 - -0.4 423,708 - +0.9 423,708 - -0.6 423,708 - +0.6 423,715 + +0.2 423,716 - +1.4 423,716 - -1.4 423,772 + +1.7 423,773 - -0.6 423,778 + +1.7 423,778 + -1.1 423,779 - -1.9 423,793 + +0.9 423,793 + +0.2 423,793 + +1.4 423,793 + +0.1 423,830 + +0.5 423,832 + +0.5 423,833 - +1.9 423,833 - -2.2 423,890 + +0.2 423,890 + -1.2 423,890 + -0.6 423,890 + +1.4 423,891 - -2.5 423,891 - -2.2 423,891 - -1.2 423,891 - +0.9 423,891 - -0.2 423,891 - +1.0 423,891 - +1.7 423,893 + -0.6 423,893 + -0.7 423,893 + +0.5 423,893 + -0.2 423,893 + +0.4 423,893 + -0.3 423,893 + -0.1 423,893 + +1.2 423,893 + -1.0 423,894 - +0.6 423,894 - -1.5 423,894 - -0.2 423,894 - +0.5 423,894 - -1.1 423,894 - +1.2 423,969 - -2.1 424,005 - +0.4 424,005 - +0.1 424,017 + -0.7 424,017 + -1.4 424,017 + +0.4 424,045 + -2.1 424,045 + -1.6 424,045 + +1.5 424,046 - +1.3 424,046 - +1.1 424,046 - +1.8 424,046 - +0.4 424,048 + +0.7 424,048 + +0.9 424,048 + +0.1 424,048 + +0.4 424,048 + +0.3 424,048 + +0.3 424,048 + +0.9 424,049 - -0.5 424,049 - -0.7 424,049 - +0.7 424,049 - +5.0 424,049 - +1.3 424,049 - -2.7 424,049 - -1.6 424,049 - +1.1 424,049 - +2.1 424,073 + +0.7 424,073 + +1.2 424,149 + -0.1 424,149 + -1.9 424,168 + +0.7 424,168 + -0.5 424,169 - -1.5 424,169 - +1.6 424,193 + +0.8 424,193 + +1.8 424,193 + -0.6 424,193 + -0.2 424,193 + +1.4 424,193 + +2.0 424,193 + +0.3 424,194 - -0.0 424,194 - +1.4 424,194 - +1.6 424,283 - +1.1 424,311 + -1.9 424,312 - +1.1 424,312 - +0.9 424,315 + +1.2 424,331 + +0.6 424,331 + +0.6 424,331 + +0.4 424,332 - +0.5 424,358 + +0.0 424,359 - -0.1 424,526 - IAI47_20895 0.14 -0.6 424,552 - IAI47_20895 0.16 -0.2 424,613 + IAI47_20895 0.22 -1.5 424,613 + IAI47_20895 0.22 -0.5 424,613 + IAI47_20895 0.22 -0.9 424,613 + IAI47_20895 0.22 +2.0 424,613 + IAI47_20895 0.22 +0.2 424,613 + IAI47_20895 0.22 -0.4 424,613 + IAI47_20895 0.22 -1.7 424,613 + IAI47_20895 0.22 -0.5 424,614 - IAI47_20895 0.22 -1.8 424,614 - IAI47_20895 0.22 -0.9 424,614 - IAI47_20895 0.22 +0.8 424,614 - IAI47_20895 0.22 -0.6 424,756 + IAI47_20895 0.35 +1.2 424,756 + IAI47_20895 0.35 +0.5 424,756 + IAI47_20895 0.35 +0.7 424,757 - IAI47_20895 0.35 -1.5 424,757 - IAI47_20895 0.35 -1.2
Or see this region's nucleotide sequence