Experiment: Cisplatin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS23255 and HSERO_RS23260 are separated by 32 nucleotides HSERO_RS23260 and HSERO_RS23265 overlap by 4 nucleotides HSERO_RS23265 and HSERO_RS23270 overlap by 4 nucleotides
HSERO_RS23255: HSERO_RS23255 - ABC transporter permease, at 5,337,460 to 5,338,326
_RS23255
HSERO_RS23260: HSERO_RS23260 - ABC transporter permease, at 5,338,359 to 5,339,363
_RS23260
HSERO_RS23265: HSERO_RS23265 - ABC transporter, at 5,339,360 to 5,340,127
_RS23265
HSERO_RS23270: HSERO_RS23270 - ABC transporter, at 5,340,124 to 5,340,828
_RS23270
Position (kb) 5338
5339
5340 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5337.430 kb on - strand at 5337.558 kb on - strand, within HSERO_RS23255 at 5337.758 kb on + strand, within HSERO_RS23255 at 5337.758 kb on + strand, within HSERO_RS23255 at 5337.842 kb on - strand, within HSERO_RS23255 at 5337.927 kb on - strand, within HSERO_RS23255 at 5338.073 kb on - strand, within HSERO_RS23255 at 5338.161 kb on + strand, within HSERO_RS23255 at 5338.330 kb on + strand at 5338.519 kb on + strand, within HSERO_RS23260 at 5338.846 kb on - strand, within HSERO_RS23260 at 5339.064 kb on - strand, within HSERO_RS23260 at 5339.135 kb on + strand, within HSERO_RS23260 at 5339.148 kb on - strand, within HSERO_RS23260 at 5339.446 kb on + strand, within HSERO_RS23265 at 5339.952 kb on + strand, within HSERO_RS23265 at 5339.960 kb on - strand, within HSERO_RS23265 at 5340.054 kb on - strand at 5340.228 kb on - strand, within HSERO_RS23270 at 5340.228 kb on - strand, within HSERO_RS23270 at 5340.253 kb on + strand, within HSERO_RS23270 at 5340.261 kb on - strand, within HSERO_RS23270
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.003 mg/ml remove 5,337,430 - -3.1 5,337,558 - HSERO_RS23255 0.11 -0.7 5,337,758 + HSERO_RS23255 0.34 -0.1 5,337,758 + HSERO_RS23255 0.34 +1.8 5,337,842 - HSERO_RS23255 0.44 -0.2 5,337,927 - HSERO_RS23255 0.54 -1.2 5,338,073 - HSERO_RS23255 0.71 +0.4 5,338,161 + HSERO_RS23255 0.81 -0.8 5,338,330 + +0.8 5,338,519 + HSERO_RS23260 0.16 -1.1 5,338,846 - HSERO_RS23260 0.48 -0.3 5,339,064 - HSERO_RS23260 0.70 -0.9 5,339,135 + HSERO_RS23260 0.77 -0.7 5,339,148 - HSERO_RS23260 0.79 +0.4 5,339,446 + HSERO_RS23265 0.11 -1.3 5,339,952 + HSERO_RS23265 0.77 +0.8 5,339,960 - HSERO_RS23265 0.78 -0.7 5,340,054 - -0.4 5,340,228 - HSERO_RS23270 0.15 +1.9 5,340,228 - HSERO_RS23270 0.15 -2.0 5,340,253 + HSERO_RS23270 0.18 +0.8 5,340,261 - HSERO_RS23270 0.19 -1.0
Or see this region's nucleotide sequence