Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS22980

Experiment: Cisplatin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.003 mg/ml
5,272,401	+		HSERO_RS22975	0.49	-0.7
5,272,426	-		HSERO_RS22975	0.51	+2.2
5,272,433	+		HSERO_RS22975	0.51	+0.5
5,272,617	+		HSERO_RS22975	0.63	-0.4
5,272,641	-		HSERO_RS22975	0.65	-0.4
5,272,654	+		HSERO_RS22975	0.66	-0.1
5,272,691	+		HSERO_RS22975	0.68	-0.2
5,272,743	+		HSERO_RS22975	0.71	+0.8
5,272,751	-		HSERO_RS22975	0.72	+0.2
5,272,767	+		HSERO_RS22975	0.73	-2.2
5,272,767	+		HSERO_RS22975	0.73	-0.4
5,272,805	-		HSERO_RS22975	0.75	-0.2
5,272,887	-		HSERO_RS22975	0.80	+0.3
5,272,984	+		HSERO_RS22975	0.87	+0.4
5,273,073	+				-0.2
5,273,073	+				-0.8
5,273,137	+				-0.3
5,273,149	+				+0.1
5,273,218	-				-0.4
5,273,375	+				-0.4
5,273,500	+		HSERO_RS22980	0.18	-2.9
5,273,556	+		HSERO_RS22980	0.25	-0.8
5,273,677	-		HSERO_RS22980	0.39	-1.1
5,273,762	+		HSERO_RS22980	0.50	-1.3
5,273,824	-		HSERO_RS22980	0.57	-0.6
5,273,840	+		HSERO_RS22980	0.59	-1.8
5,273,840	+		HSERO_RS22980	0.59	-1.0
5,274,014	-		HSERO_RS22980	0.80	-0.4
5,274,014	-		HSERO_RS22980	0.80	-0.3
5,274,140	+				-0.8
5,274,148	-				-0.6
5,274,158	-				-0.8
5,274,175	-				+1.1
5,274,180	-				-0.4
5,274,232	+				-0.4
5,274,311	-		HSERO_RS22985	0.11	-3.4
5,274,408	-		HSERO_RS22985	0.18	-0.0
5,274,499	+		HSERO_RS22985	0.26	-0.2
5,274,687	+		HSERO_RS22985	0.41	-0.9
5,274,695	-		HSERO_RS22985	0.41	-2.1
5,274,959	-		HSERO_RS22985	0.63	+0.7
5,274,987	+		HSERO_RS22985	0.65	-0.9