Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS21595

Experiment: Cisplatin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.003 mg/ml
4,942,810	+		HSERO_RS21590	0.76	-2.3
4,943,060	+		HSERO_RS21590	0.88	-1.2
4,943,099	-		HSERO_RS21590	0.90	-2.0
4,943,123	+				-0.6
4,943,346	+				-0.7
4,943,404	-				-1.6
4,943,413	-				-0.9
4,943,480	+				-1.4
4,943,500	+				+0.5
4,943,553	+				+0.6
4,943,553	+				-0.2
4,943,593	-				+0.3
4,943,627	-				-1.5
4,943,754	-				-0.6
4,943,881	+				+0.9
4,944,103	-		HSERO_RS21595	0.17	-0.1
4,944,127	-		HSERO_RS21595	0.18	-2.5
4,944,195	+		HSERO_RS21595	0.20	-0.2
4,944,208	+		HSERO_RS21595	0.21	-0.7
4,944,440	-		HSERO_RS21595	0.29	+0.4
4,944,562	+		HSERO_RS21595	0.34	-0.6
4,944,577	+		HSERO_RS21595	0.35	+0.2
4,944,702	+		HSERO_RS21595	0.39	+0.4
4,944,839	-		HSERO_RS21595	0.44	-0.4
4,944,953	+		HSERO_RS21595	0.49	-0.5
4,944,953	+		HSERO_RS21595	0.49	-0.9
4,944,961	-		HSERO_RS21595	0.49	-2.6
4,944,961	-		HSERO_RS21595	0.49	+0.4
4,945,049	-		HSERO_RS21595	0.52	+1.1
4,945,070	-		HSERO_RS21595	0.53	-0.0
4,945,075	-		HSERO_RS21595	0.53	-0.1
4,945,078	+		HSERO_RS21595	0.53	-0.7
4,945,205	+		HSERO_RS21595	0.58	+0.6
4,945,213	-		HSERO_RS21595	0.58	-0.4
4,945,278	-		HSERO_RS21595	0.61	+0.1
4,945,290	+		HSERO_RS21595	0.61	-0.1
4,945,290	+		HSERO_RS21595	0.61	+0.5
4,945,302	+		HSERO_RS21595	0.62	+2.0
4,945,303	+		HSERO_RS21595	0.62	+1.5
4,945,332	+		HSERO_RS21595	0.63	-0.5
4,945,513	+		HSERO_RS21595	0.70	-0.4
4,945,617	+		HSERO_RS21595	0.74	+0.6
4,945,703	-		HSERO_RS21595	0.77	+0.4
4,945,706	+		HSERO_RS21595	0.77	+0.3
4,945,859	+		HSERO_RS21595	0.83	+0.8
4,946,008	-		HSERO_RS21595	0.88	-0.3
4,946,128	-				+2.5
4,946,147	-				-0.2
4,946,245	-				-1.8
4,946,275	+				+0.6
4,946,397	+				-0.0
4,946,405	-				+0.1
4,946,415	-				+0.5
4,946,518	-		HSERO_RS21600	0.13	+1.2
4,946,556	+		HSERO_RS21600	0.15	-0.6
4,946,556	+		HSERO_RS21600	0.15	-0.6
4,946,556	+		HSERO_RS21600	0.15	-0.7
4,946,564	-		HSERO_RS21600	0.16	-0.3
4,946,564	-		HSERO_RS21600	0.16	+0.8
4,946,639	+		HSERO_RS21600	0.20	+0.5
4,946,647	-		HSERO_RS21600	0.21	-0.6
4,946,647	-		HSERO_RS21600	0.21	+0.0
4,946,647	-		HSERO_RS21600	0.21	-0.1
4,946,746	+		HSERO_RS21600	0.27	+0.4
4,946,791	-		HSERO_RS21600	0.30	-1.1
4,946,870	+		HSERO_RS21600	0.35	+0.2
4,946,903	+		HSERO_RS21600	0.37	-2.3
4,946,908	+		HSERO_RS21600	0.37	+0.0
4,946,939	-		HSERO_RS21600	0.39	-1.3
4,946,944	+		HSERO_RS21600	0.39	-0.4
4,946,992	+		HSERO_RS21600	0.42	+0.5
4,947,190	-		HSERO_RS21600	0.55	-1.2
4,947,192	-		HSERO_RS21600	0.55	-0.0
4,947,192	-				+0.2
4,947,201	+		HSERO_RS21600	0.55	-0.7
4,947,257	-		HSERO_RS21600	0.59	-0.0
4,947,307	+		HSERO_RS21600	0.62	+0.7
4,947,307	+		HSERO_RS21600	0.62	+0.7
4,947,312	+		HSERO_RS21600	0.62	-0.9
4,947,315	-		HSERO_RS21600	0.62	-1.8
4,947,315	-		HSERO_RS21600	0.62	+0.2
4,947,315	-		HSERO_RS21600	0.62	-1.4