Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS21585

Experiment: Cisplatin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.003 mg/ml
4,939,640	+		HSERO_RS21580	0.12	+0.1
4,939,670	+		HSERO_RS21580	0.15	-2.0
4,939,670	+		HSERO_RS21580	0.15	-2.5
4,939,678	-		HSERO_RS21580	0.16	-0.1
4,939,907	+		HSERO_RS21580	0.37	+0.0
4,939,915	-		HSERO_RS21580	0.38	+0.1
4,940,019	+		HSERO_RS21580	0.48	+2.5
4,940,076	-		HSERO_RS21580	0.54	-0.2
4,940,416	+		HSERO_RS21580	0.86	+0.2
4,940,416	+		HSERO_RS21580	0.86	+0.8
4,940,424	-		HSERO_RS21580	0.87	-0.1
4,940,538	-				+0.7
4,940,826	-		HSERO_RS21585	0.40	+0.2
4,940,946	+		HSERO_RS21585	0.66	-1.0
4,940,954	-		HSERO_RS21585	0.67	-0.5
4,941,064	+				-1.8
4,941,165	-				-0.2
4,941,165	-				-0.2
4,941,189	-				-0.7
4,941,266	-				-1.0
4,941,271	-				-1.0
4,941,301	+				-1.1
4,941,315	-				-2.3
4,941,595	+		HSERO_RS21590	0.17	-0.8
4,941,691	+		HSERO_RS21590	0.22	-1.9
4,941,691	+		HSERO_RS21590	0.22	-0.6
4,941,699	-		HSERO_RS21590	0.22	-0.7
4,941,713	+		HSERO_RS21590	0.23	-2.0
4,941,739	-		HSERO_RS21590	0.24	-2.5
4,941,910	-		HSERO_RS21590	0.32	-2.4