Experiment: Cisplatin 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS20865 and HSERO_RS20870 are separated by 143 nucleotides HSERO_RS20870 and HSERO_RS20875 are separated by 161 nucleotides
HSERO_RS20865: HSERO_RS20865 - ABC transporter permease, at 4,773,354 to 4,774,613
_RS20865
HSERO_RS20870: HSERO_RS20870 - hypothetical protein, at 4,774,757 to 4,775,872
_RS20870
HSERO_RS20875: HSERO_RS20875 - hypothetical protein, at 4,776,034 to 4,776,795
_RS20875
Position (kb) 4774
4775
4776 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4773.779 kb on - strand, within HSERO_RS20865 at 4773.797 kb on + strand at 4773.838 kb on + strand, within HSERO_RS20865 at 4773.846 kb on - strand, within HSERO_RS20865 at 4773.874 kb on + strand, within HSERO_RS20865 at 4774.097 kb on + strand, within HSERO_RS20865 at 4774.225 kb on - strand, within HSERO_RS20865 at 4774.309 kb on - strand, within HSERO_RS20865 at 4774.786 kb on - strand at 4774.796 kb on - strand at 4774.811 kb on + strand at 4774.876 kb on - strand, within HSERO_RS20870 at 4775.016 kb on + strand, within HSERO_RS20870 at 4775.016 kb on + strand, within HSERO_RS20870 at 4775.071 kb on + strand, within HSERO_RS20870 at 4775.161 kb on + strand, within HSERO_RS20870 at 4775.161 kb on + strand, within HSERO_RS20870 at 4775.210 kb on + strand, within HSERO_RS20870 at 4775.228 kb on + strand, within HSERO_RS20870 at 4775.251 kb on - strand, within HSERO_RS20870 at 4775.294 kb on - strand, within HSERO_RS20870 at 4775.301 kb on + strand, within HSERO_RS20870 at 4775.301 kb on + strand, within HSERO_RS20870 at 4775.433 kb on - strand, within HSERO_RS20870 at 4775.539 kb on + strand, within HSERO_RS20870 at 4775.631 kb on - strand, within HSERO_RS20870 at 4775.658 kb on - strand, within HSERO_RS20870 at 4775.806 kb on + strand at 4775.814 kb on - strand at 4775.816 kb on - strand at 4775.851 kb on - strand at 4775.853 kb on + strand at 4776.077 kb on - strand at 4776.219 kb on - strand, within HSERO_RS20875 at 4776.302 kb on - strand, within HSERO_RS20875 at 4776.332 kb on + strand, within HSERO_RS20875 at 4776.413 kb on - strand, within HSERO_RS20875 at 4776.416 kb on + strand, within HSERO_RS20875 at 4776.424 kb on - strand, within HSERO_RS20875 at 4776.457 kb on + strand, within HSERO_RS20875 at 4776.525 kb on + strand, within HSERO_RS20875 at 4776.589 kb on - strand, within HSERO_RS20875 at 4776.595 kb on - strand, within HSERO_RS20875 at 4776.717 kb on - strand, within HSERO_RS20875 at 4776.841 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.003 mg/ml remove 4,773,779 - HSERO_RS20865 0.34 -1.4 4,773,797 + +2.5 4,773,838 + HSERO_RS20865 0.38 +0.1 4,773,846 - HSERO_RS20865 0.39 +0.6 4,773,874 + HSERO_RS20865 0.41 -0.3 4,774,097 + HSERO_RS20865 0.59 -1.5 4,774,225 - HSERO_RS20865 0.69 +0.2 4,774,309 - HSERO_RS20865 0.76 -1.0 4,774,786 - +0.7 4,774,796 - -0.1 4,774,811 + -0.5 4,774,876 - HSERO_RS20870 0.11 +0.1 4,775,016 + HSERO_RS20870 0.23 +0.4 4,775,016 + HSERO_RS20870 0.23 -0.1 4,775,071 + HSERO_RS20870 0.28 +0.5 4,775,161 + HSERO_RS20870 0.36 -2.0 4,775,161 + HSERO_RS20870 0.36 -1.2 4,775,210 + HSERO_RS20870 0.41 +0.5 4,775,228 + HSERO_RS20870 0.42 -0.0 4,775,251 - HSERO_RS20870 0.44 -0.7 4,775,294 - HSERO_RS20870 0.48 +0.1 4,775,301 + HSERO_RS20870 0.49 +0.2 4,775,301 + HSERO_RS20870 0.49 -0.2 4,775,433 - HSERO_RS20870 0.61 +0.7 4,775,539 + HSERO_RS20870 0.70 +0.2 4,775,631 - HSERO_RS20870 0.78 -3.2 4,775,658 - HSERO_RS20870 0.81 -1.4 4,775,806 + -0.7 4,775,814 - +0.0 4,775,816 - -0.3 4,775,851 - -1.1 4,775,853 + -1.7 4,776,077 - +0.1 4,776,219 - HSERO_RS20875 0.24 -0.7 4,776,302 - HSERO_RS20875 0.35 -0.3 4,776,332 + HSERO_RS20875 0.39 +0.0 4,776,413 - HSERO_RS20875 0.50 -0.9 4,776,416 + HSERO_RS20875 0.50 -1.2 4,776,424 - HSERO_RS20875 0.51 -0.4 4,776,457 + HSERO_RS20875 0.56 +0.3 4,776,525 + HSERO_RS20875 0.64 -0.1 4,776,589 - HSERO_RS20875 0.73 -0.1 4,776,595 - HSERO_RS20875 0.74 -0.6 4,776,717 - HSERO_RS20875 0.90 -2.0 4,776,841 - -0.6
Or see this region's nucleotide sequence