Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS19540

Experiment: Cisplatin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.003 mg/ml
4,477,422	+				+2.3
4,477,483	+				-2.4
4,477,737	+		HSERO_RS19535	0.31	-3.0
4,477,902	-		HSERO_RS19535	0.51	-2.6
4,478,223	-		HSERO_RS19535	0.88	-0.2
4,478,358	+				-0.7
4,478,548	-		HSERO_RS19540	0.20	-0.5
4,478,553	+		HSERO_RS19540	0.20	-0.9
4,478,855	+		HSERO_RS19540	0.47	-2.3
4,478,867	+		HSERO_RS19540	0.48	+0.2
4,479,187	-		HSERO_RS19540	0.76	-0.1
4,479,228	-		HSERO_RS19540	0.80	-0.7
4,479,240	-		HSERO_RS19540	0.81	-0.9
4,479,264	-		HSERO_RS19540	0.83	-1.3
4,479,291	+		HSERO_RS19540	0.85	-0.1
4,479,364	+				-0.2
4,479,406	+				+0.5
4,479,453	+				+0.7
4,479,547	-		HSERO_RS19545	0.11	-0.3
4,479,672	-				+0.4
4,479,675	+		HSERO_RS19545	0.27	-0.2
4,479,876	+		HSERO_RS19545	0.51	+0.4
4,479,876	+		HSERO_RS19545	0.51	-1.0
4,479,876	+		HSERO_RS19545	0.51	+0.3
4,479,884	-		HSERO_RS19545	0.52	-0.2
4,479,922	-		HSERO_RS19545	0.57	+0.1
4,479,937	-		HSERO_RS19545	0.58	-0.5
4,479,957	+		HSERO_RS19545	0.61	-0.3
4,480,060	-		HSERO_RS19545	0.73	-0.6
4,480,083	+		HSERO_RS19545	0.76	-0.0
4,480,172	+		HSERO_RS19545	0.87	-0.5
4,480,220	+				+0.4
4,480,221	+				+0.9
4,480,358	+				-1.1
4,480,408	-				+0.4