Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS16415

Experiment: Cisplatin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.003 mg/ml
3,756,620	-		HSERO_RS16405	0.81	+0.9
3,756,642	-		HSERO_RS16405	0.84	-0.4
3,756,815	-				+1.7
3,756,994	+		HSERO_RS16410	0.26	+0.6
3,757,007	-		HSERO_RS16410	0.28	-1.5
3,757,056	-		HSERO_RS16410	0.36	-1.0
3,757,206	+		HSERO_RS16410	0.59	-0.1
3,757,327	-		HSERO_RS16410	0.78	-0.2
3,757,424	+				+0.9
3,757,432	-				-0.5
3,757,551	+				+0.4
3,757,609	+				-0.3
3,757,628	+				-0.3
3,757,633	+				+0.1
3,757,838	-		HSERO_RS16415	0.32	-1.2
3,757,852	-		HSERO_RS16415	0.33	-2.0
3,757,897	-		HSERO_RS16415	0.38	-1.2
3,757,916	-		HSERO_RS16415	0.41	-0.6
3,757,938	+		HSERO_RS16415	0.43	-0.1
3,757,946	-		HSERO_RS16415	0.44	-1.1
3,757,947	-		HSERO_RS16415	0.44	+1.0
3,757,951	+		HSERO_RS16415	0.45	+0.6
3,757,951	+		HSERO_RS16415	0.45	-0.3
3,758,033	+		HSERO_RS16415	0.54	-0.7
3,758,033	+		HSERO_RS16415	0.54	-0.6
3,758,043	-		HSERO_RS16415	0.55	-0.2
3,758,219	-		HSERO_RS16415	0.75	-1.2
3,758,949	+		HSERO_RS16420	0.53	-0.9
3,759,076	-		HSERO_RS16420	0.68	-0.8
3,759,126	+		HSERO_RS16420	0.74	-0.4
3,759,259	-		HSERO_RS16420	0.90	-0.8
3,759,341	+				-0.0
3,759,341	+				+0.1
3,759,349	-				-0.2
3,759,349	-				-0.4
3,759,349	-				-0.5