Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS16010

Experiment: Cisplatin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.003 mg/ml
3,656,064	+		HSERO_RS16005	0.26	+0.2
3,656,064	+		HSERO_RS16005	0.26	-0.2
3,656,064	+		HSERO_RS16005	0.26	-0.2
3,656,064	+		HSERO_RS16005	0.26	+1.6
3,656,064	+		HSERO_RS16005	0.26	-0.5
3,656,064	+		HSERO_RS16005	0.26	-0.8
3,656,064	+		HSERO_RS16005	0.26	-1.4
3,656,072	-		HSERO_RS16005	0.27	-3.0
3,656,072	-		HSERO_RS16005	0.27	+0.7
3,656,072	-		HSERO_RS16005	0.27	+0.1
3,656,072	-		HSERO_RS16005	0.27	-1.6
3,656,072	-		HSERO_RS16005	0.27	-0.8
3,656,072	-		HSERO_RS16005	0.27	-0.0
3,656,221	-				+2.6
3,656,460	+		HSERO_RS16005	0.63	-0.8
3,656,507	+		HSERO_RS16005	0.68	+0.4
3,656,522	+		HSERO_RS16005	0.69	+0.8
3,656,724	+		HSERO_RS16005	0.88	-2.4
3,656,724	+		HSERO_RS16005	0.88	-1.6
3,656,732	-		HSERO_RS16005	0.89	-0.3
3,656,732	-		HSERO_RS16005	0.89	+0.4
3,656,755	-				-0.0
3,656,762	-				+0.1
3,656,917	+				-3.5
3,656,925	-				+0.4
3,656,932	+				+0.2
3,656,932	+				-0.3
3,657,029	+				+0.1
3,657,148	+		HSERO_RS16010	0.17	+0.1
3,657,293	-		HSERO_RS16010	0.41	-0.2
3,657,380	+		HSERO_RS16010	0.55	-0.8
3,657,452	+		HSERO_RS16010	0.66	+0.1
3,657,463	+		HSERO_RS16010	0.68	-1.4
3,657,463	+		HSERO_RS16010	0.68	-0.4
3,657,471	-		HSERO_RS16010	0.69	-0.5
3,657,632	+				+0.1
3,657,811	-				+0.2
3,657,893	+				-0.1
3,657,893	+				-0.7
3,657,980	-				-0.1
3,658,020	+				-0.4
3,658,065	+		HSERO_RS16015	0.13	-0.3
3,658,087	+		HSERO_RS16015	0.15	+0.0
3,658,191	+		HSERO_RS16015	0.25	-2.7
3,658,372	+		HSERO_RS16015	0.42	-0.0
3,658,380	-		HSERO_RS16015	0.42	-1.2
3,658,380	-		HSERO_RS16015	0.42	-0.3
3,658,509	+		HSERO_RS16015	0.55	-2.4
3,658,599	-		HSERO_RS16015	0.63	-0.8