Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS15225

Experiment: Cisplatin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.003 mg/ml
3,455,038	-		HSERO_RS15220	0.41	+1.1
3,455,174	+		HSERO_RS15220	0.51	+1.2
3,455,332	-		HSERO_RS15220	0.62	-2.4
3,455,356	-		HSERO_RS15220	0.64	+0.3
3,455,567	-		HSERO_RS15220	0.79	-1.7
3,455,621	-		HSERO_RS15220	0.82	-0.1
3,455,700	-		HSERO_RS15220	0.88	-0.7
3,455,866	-				+0.4
3,455,889	-				-0.4
3,455,896	-				+0.2
3,455,933	-				+1.1
3,455,941	+				-0.5
3,456,397	+				+0.8
3,456,749	+		HSERO_RS15225	0.55	+0.3
3,456,749	+		HSERO_RS15225	0.55	-2.1
3,456,751	+		HSERO_RS15225	0.55	-0.7
3,456,804	+		HSERO_RS15225	0.59	+0.1
3,456,804	+		HSERO_RS15225	0.59	+0.3
3,456,812	-		HSERO_RS15225	0.60	-1.9
3,456,842	+		HSERO_RS15225	0.62	+0.3
3,456,958	-		HSERO_RS15225	0.71	+0.3
3,457,257	+				+0.3
3,457,490	+				+0.0
3,457,493	-				+0.3
3,457,552	-		HSERO_RS15230	0.11	+0.2
3,457,625	-		HSERO_RS15230	0.17	-0.4
3,457,648	-		HSERO_RS15230	0.19	+0.2
3,457,661	-		HSERO_RS15230	0.20	-0.2
3,457,774	-		HSERO_RS15230	0.29	-0.2
3,457,841	+		HSERO_RS15230	0.35	-0.4
3,457,880	+		HSERO_RS15230	0.38	-0.6
3,457,888	-		HSERO_RS15230	0.39	+0.6
3,458,159	+		HSERO_RS15230	0.61	-1.4
3,458,272	-		HSERO_RS15230	0.70	-1.1
3,458,287	+		HSERO_RS15230	0.72	-0.8