Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS15220

Experiment: Cisplatin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.003 mg/ml
3,453,540	+		HSERO_RS15215	0.56	-0.2
3,453,608	+		HSERO_RS15215	0.60	+0.1
3,453,616	-		HSERO_RS15215	0.61	+0.1
3,453,725	-		HSERO_RS15215	0.68	-0.3
3,453,802	-		HSERO_RS15215	0.73	+0.1
3,453,832	+		HSERO_RS15215	0.74	+0.3
3,453,840	-		HSERO_RS15215	0.75	-0.7
3,453,939	-		HSERO_RS15215	0.81	-0.8
3,454,075	+		HSERO_RS15215	0.89	+1.2
3,454,098	-				-1.2
3,454,197	+				+0.1
3,454,350	+				+0.2
3,454,350	+				-0.1
3,454,488	+				+0.5
3,454,703	-		HSERO_RS15220	0.17	+0.8
3,454,754	+		HSERO_RS15220	0.21	-2.2
3,454,813	+		HSERO_RS15220	0.25	-1.8
3,454,834	+		HSERO_RS15220	0.27	-0.6
3,454,842	-		HSERO_RS15220	0.27	+0.6
3,455,038	-		HSERO_RS15220	0.41	+1.1
3,455,174	+		HSERO_RS15220	0.51	+1.2
3,455,332	-		HSERO_RS15220	0.62	-2.4
3,455,356	-		HSERO_RS15220	0.64	+0.3
3,455,567	-		HSERO_RS15220	0.79	-1.7
3,455,621	-		HSERO_RS15220	0.82	-0.1
3,455,700	-		HSERO_RS15220	0.88	-0.7
3,455,866	-				+0.4
3,455,889	-				-0.4
3,455,896	-				+0.2
3,455,933	-				+1.1
3,455,941	+				-0.5
3,456,397	+				+0.8
3,456,749	+		HSERO_RS15225	0.55	+0.3
3,456,749	+		HSERO_RS15225	0.55	-2.1
3,456,751	+		HSERO_RS15225	0.55	-0.7
3,456,804	+		HSERO_RS15225	0.59	+0.1
3,456,804	+		HSERO_RS15225	0.59	+0.3
3,456,812	-		HSERO_RS15225	0.60	-1.9
3,456,842	+		HSERO_RS15225	0.62	+0.3