Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10595

Experiment: Cisplatin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.003 mg/ml
2,384,345	-		HSERO_RS10590	0.57	+0.4
2,384,463	+		HSERO_RS10590	0.63	+0.4
2,384,520	-		HSERO_RS10590	0.67	+0.2
2,384,553	+		HSERO_RS10590	0.69	-0.3
2,384,576	+		HSERO_RS10590	0.70	-2.7
2,384,586	-		HSERO_RS10590	0.70	-0.4
2,384,620	+		HSERO_RS10590	0.72	-2.3
2,384,658	-		HSERO_RS10590	0.75	-0.6
2,384,760	-		HSERO_RS10590	0.80	+0.9
2,384,760	-		HSERO_RS10590	0.80	+0.8
2,384,774	+		HSERO_RS10590	0.81	-0.6
2,385,074	-				-1.0
2,385,249	-				-0.6
2,385,273	+				-0.3
2,385,657	+		HSERO_RS10595	0.36	+0.1
2,385,872	-		HSERO_RS10595	0.60	-0.0
2,385,926	-		HSERO_RS10595	0.66	-0.1
2,385,964	+		HSERO_RS10595	0.70	-0.0
2,386,090	-		HSERO_RS10595	0.84	-0.0
2,386,311	+				+0.6
2,386,436	-				+0.3
2,386,579	-		HSERO_RS10600	0.15	-0.3
2,386,589	-		HSERO_RS10600	0.16	-0.6
2,386,746	-		HSERO_RS10600	0.27	-1.4
2,386,746	-		HSERO_RS10600	0.27	-1.9
2,386,773	-		HSERO_RS10600	0.29	-2.5
2,386,923	-		HSERO_RS10600	0.40	-1.9
2,387,111	+		HSERO_RS10600	0.54	-0.4
2,387,196	-				+1.4