Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS06635

Experiment: Cisplatin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.003 mg/ml
1,507,805	-				-0.4
1,507,806	-				+0.9
1,507,816	-				-0.3
1,507,816	-				-1.0
1,507,886	-		HSERO_RS06630	0.11	+0.4
1,507,936	+		HSERO_RS06630	0.17	+1.0
1,507,944	-		HSERO_RS06630	0.18	+0.4
1,508,495	+		HSERO_RS06630	0.84	+0.7
1,508,535	-		HSERO_RS06630	0.88	-1.4
1,508,572	+				-1.2
1,508,632	-				+0.2
1,508,666	+				+1.4
1,508,683	+				+0.2
1,508,696	-				-0.1
1,508,712	+				-0.4
1,508,718	+				+0.7
1,508,775	-				+0.0
1,508,786	-		HSERO_RS06635	0.11	+0.5
1,508,891	-		HSERO_RS06635	0.21	+0.2
1,508,910	-		HSERO_RS06635	0.23	+1.0
1,508,989	-		HSERO_RS06635	0.30	+0.2
1,509,159	+		HSERO_RS06635	0.46	+0.1
1,509,242	-		HSERO_RS06635	0.54	+0.0
1,509,252	+		HSERO_RS06635	0.55	+0.9
1,509,265	-		HSERO_RS06635	0.56	-0.9
1,509,683	+				-0.0
1,510,050	+		HSERO_RS06640	0.45	+2.1
1,510,093	+		HSERO_RS06640	0.52	-0.3
1,510,114	+		HSERO_RS06640	0.55	+1.6
1,510,122	-		HSERO_RS06640	0.56	+0.6
1,510,246	+		HSERO_RS06640	0.76	-0.5
1,510,360	+				+0.6
1,510,395	-				+0.4
1,510,404	+				+0.2
1,510,633	+				+1.4