Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS06080

Experiment: Cisplatin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.003 mg/ml
1,369,429	-		HSERO_RS06070	0.34	+0.9
1,369,446	+		HSERO_RS06070	0.36	-0.3
1,369,570	-				-1.2
1,369,735	+		HSERO_RS06070	0.78	-2.5
1,370,008	+		HSERO_RS06075	0.30	+0.1
1,370,016	-		HSERO_RS06075	0.33	-0.0
1,370,109	+		HSERO_RS06075	0.57	+0.8
1,370,136	-		HSERO_RS06075	0.64	+0.3
1,370,438	+		HSERO_RS06080	0.13	-1.9
1,370,496	+		HSERO_RS06080	0.25	-1.6
1,370,534	+		HSERO_RS06080	0.34	-2.2
1,370,574	+		HSERO_RS06080	0.43	-0.9
1,370,574	+		HSERO_RS06080	0.43	-2.9
1,370,647	+		HSERO_RS06080	0.59	-1.9
1,370,647	+		HSERO_RS06080	0.59	-1.1
1,370,700	+		HSERO_RS06080	0.70	-1.2
1,370,734	-		HSERO_RS06080	0.78	-1.2
1,370,756	+		HSERO_RS06080	0.82	-3.0
1,370,764	-		HSERO_RS06080	0.84	-4.4
1,370,822	-				-1.8
1,370,907	+				+0.5
1,370,922	-				+0.1
1,370,980	-				+0.1
1,371,021	+				+0.3
1,371,039	+				-0.3
1,371,042	-				-1.2
1,371,153	+				-1.1
1,371,260	+		HSERO_RS06085	0.19	-0.5
1,371,442	-		HSERO_RS06085	0.33	+0.4
1,371,642	+		HSERO_RS06085	0.50	-0.3
1,371,674	+		HSERO_RS06085	0.52	+0.3
1,371,674	+		HSERO_RS06085	0.52	+0.2
1,371,687	-		HSERO_RS06085	0.53	+0.2
1,371,757	-		HSERO_RS06085	0.59	-1.7
1,371,835	-		HSERO_RS06085	0.65	-0.3