Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS04190

Experiment: Cisplatin 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.003 mg/ml
916,895	-		HSERO_RS04190	0.18	-0.7
917,013	-		HSERO_RS04190	0.24	+0.1
917,013	-		HSERO_RS04190	0.24	-0.1
917,013	-		HSERO_RS04190	0.24	-0.1
917,013	-				+0.9
917,211	+		HSERO_RS04190	0.34	-1.5
917,305	+		HSERO_RS04190	0.39	-0.6
917,671	+		HSERO_RS04190	0.58	-2.2
917,929	-		HSERO_RS04190	0.72	-0.6
917,934	-		HSERO_RS04190	0.72	-0.2
917,934	-				+4.4
918,092	-		HSERO_RS04190	0.80	-0.2
918,273	+		HSERO_RS04190	0.90	-1.5
918,302	-				-1.7
918,342	-				-0.8
918,478	+				-1.2
918,478	+				-0.1
918,614	-				-1.4
918,685	-				-0.3
919,118	+		HSERO_RS04195	0.27	-1.0
919,150	+		HSERO_RS04195	0.28	-0.6
919,180	-		HSERO_RS04195	0.30	+0.3
919,214	-		HSERO_RS04195	0.32	-1.0
919,274	+		HSERO_RS04195	0.35	+1.2
919,339	+		HSERO_RS04195	0.38	-0.3
919,392	-		HSERO_RS04195	0.41	-0.0
919,403	+		HSERO_RS04195	0.41	+0.8
919,411	-		HSERO_RS04195	0.42	+0.3